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1.Genome sequence
2. Gene structure annotation(gff)
3. Gene functional annotation
4. Gene ontology
5. Pfam domain
6. Gene family
Cytochrome P450 Family |
Transcription Factors Family |
Protein Kinases Family |
Ubiquitin Family |
Carbohydrate-Active Enzymes Family |
EAR motif-containing Protein |
7. KEGG
8. Network
Positive co-expression network |
Negative co-expression network |
9. Transcriptome data
SRP064423:Comparative transcriptome analysis of Gastrodia elata (Orchidaceae) in response to fungus symbiosis to identify gastrodin biosynthesis-related genes |
SRP108465:Five development period of Gastrodia elata |
SRP118053:RNA sequencing of four kinds of G. elata samples, including inbred Wu, inbred Hong, hybrid Wu-Hong and hybrid Hong-Wu Tianma. |
SRP279888:Four tissue of Gastrodia elata |
10. Related Links
GelFAP v1.0 | : Gastrodia elata gene functional analysis platform. |
NCBI | : National Center for Biotechnology Information |
NGDC | : National Genomics Data Center |
GO | : Gene Ontology Consortium |
KEGG | : Kyoto Encyclopedia of Genes and Genomes |
PlantEAR | : Functional Analysis Platform for Plant EAR Motif-Containing Proteins |
iUUCD 2.0 | : an integrated database of regulators for ubiquitin and ubiquitin-like conjugation |
CAZy database | : Carbohydrate-Active enZYmes Database in 2013. |
iTAK | : Plant Transcription Factor & Protein Kinase Identifier and Classifier. |