Detail information of GWHGAAZE033931


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003530144.16.30948E-22PREDICTED: protein ECERIFERUM 1-like isoform X1 [Glycine max]
Swissprottr|F4HVY0|CER1_ARATH6E-17Protein ECERIFERUM 1
trEMBLtr|I1KJK3|I1KJK3_SOYBN2E-22Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G14010.1}
TAIR10AT1G02205.21E-14Fatty acid hydroxylase superfamily

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000145gene12147211214912+
GWHAAZE00000145mRNA12147211214912+
GWHAAZE00000145exon12147211214912+
GWHAAZE00000145CDS12147211214912+
Transcript Sequence

Network for GWHGAAZE033931

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15404K15404, CER1 Biosynthesis of secondary metabolites map01110
Cutin, suberine and wax biosynthesismap00073

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.430
SRR3591706second leaf20.886
SRR3591707mature leaf0.000
SRR3591708Shoot apex76.877
SRR3591709Stem1.045
SRR3591710White floral bud6.020
SRR3591711White flower2.750
SRR3591712Green floral bud6.917
SRR3591713Yellow flower2.027
SRP173429 SRR8316895Juvenile bud stage 130.198
SRR8316896Juvenile bud stage 142.008
SRR8316897Juvenile bud stage 23.738
SRR8316894Third green stage 38.887
SRR8316900Third green stage 1.058
SRR8316901Third green stage 14.797
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.132
SRR8316902Silver flowering stage1.069
SRR8316904Silver flowering stage1.997
SRR8316905Silver flowering stage0.512
SRR8316906Gold flowering stage 5.602
SRR8316907Gold flowering stage 6.266
SRR8316908Gold flowering stage 5.178
SRP132670SRR6706286Control14.173
SRR6706287Light intensity 50%12.032
SRR6706288Light intensity 20%1.171
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.775
CNS0095593Slightly white alabastrum(diploid) 22.491
CNS0095594Slightly white alabastrum(diploid) 324.713
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.416
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 15.513
CNS0095599Silvery flower (diploied) 26.701
CNS0095600Silvery flower (diploied) 314.834
CNS0095601Golden flower (diploid) 11.138
CNS0095602Golden flower (diploid) 213.228
CNS0095603Golden flower (diploid) 313.300
CNS0095604Slightly white alabastrum(tetraploid) 13.603
CNS0095605Slightly white alabastrum(tetraploid) 22.578
CNS0095606Slightly white alabastrum(tetraploid) 320.233
CNS0095607Whole white alabastrum(tetraploid) 10.446
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.016
CNS0095610Silvery flower (tetraploid) 16.226
CNS0095611Silvery flower (tetraploid) 210.075
CNS0095612Silvery flower (tetraploid) 34.564
CNS0095613Golden flower (tetraploid) 110.326
CNS0095614Golden flower (tetraploid) 27.114
CNS0095615Golden flower (tetraploid) 37.392
CRA001975CRR073297Stem 183.460
CRR073298Stem 269.712
CRR073299Stem 3108.218
CRR073300Leaf 11.554
CRR073301Leaf 20.811
CRR073302Leaf 31.962
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.233
CRR073307Third green 21.947
CRR073308Third green 31.969
CRR073309Second white 12.440
CRR073310Second white 21.461
CRR073311Second white 34.681
CRR073312Silver flowering 18.174
CRR073313Silver flowering 21.733
CRR073314Silver flowering 36.271
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000