Gene detail

Detail information of GWHGAAZE033784

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010662716.1	0	PREDICTED: kinesin-like protein KIF22 isoform X1 [Vitis vinifera]
Swissprot	tr\|P46869\|FLA10_CHLRE	2E-28	Kinesin-like protein FLA10
trEMBL	tr\|E0CV00\|E0CV00_VITVI	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR10	AT5G23910.1	3E-120	ATP binding microtubule motor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000136	gene	318296	324671	+
GWHAAZE00000136	mRNA	318296	324671	+
GWHAAZE00000136	exon	318296	318468	+
GWHAAZE00000136	exon	319332	319497	+
GWHAAZE00000136	exon	320637	320837	+
GWHAAZE00000136	exon	320947	321136	+
GWHAAZE00000136	exon	321245	321450	+
GWHAAZE00000136	exon	321551	321786	+
GWHAAZE00000136	exon	321877	321919	+
GWHAAZE00000136	exon	322584	322664	+
GWHAAZE00000136	exon	322764	322811	+
GWHAAZE00000136	exon	322895	322951	+
GWHAAZE00000136	exon	323322	323409	+
GWHAAZE00000136	exon	323531	323793	+
GWHAAZE00000136	exon	323880	323926	+
GWHAAZE00000136	exon	324294	324315	+
GWHAAZE00000136	exon	324438	324506	+
GWHAAZE00000136	exon	324624	324671	+
GWHAAZE00000136	CDS	318296	318468	+
GWHAAZE00000136	CDS	319332	319497	+
GWHAAZE00000136	CDS	320637	320837	+
GWHAAZE00000136	CDS	320947	321136	+
GWHAAZE00000136	CDS	321245	321450	+
GWHAAZE00000136	CDS	321551	321786	+
GWHAAZE00000136	CDS	321877	321919	+
GWHAAZE00000136	CDS	322584	322664	+
GWHAAZE00000136	CDS	322764	322811	+
GWHAAZE00000136	CDS	322895	322951	+
GWHAAZE00000136	CDS	323322	323409	+
GWHAAZE00000136	CDS	323531	323793	+
GWHAAZE00000136	CDS	323880	323926	+
GWHAAZE00000136	CDS	324294	324315	+
GWHAAZE00000136	CDS	324438	324506	+
GWHAAZE00000136	CDS	324624	324671	+

Transcript Sequence
>GWHTAAZE033824 ATGGCAGAACCAAGCAAATCAAACACAGGCCCAAAGGTCCGTGTTATTGCCAAAATCAAGGGTTTTTCGAACTCAATCGGAGGAGGCTCATCAACACCATGGATTTCTGTACATAAACCCAACGAAAGTGGTTTATCTCATAAATTTGCAATTTCAATCGATGATCGAGCCAGTCGTAAAGATACATATGAAGTGGATTACTGCTATCAACAAAATGAAGATATTGGGTTGATATTTTCGAGAGAGATAAGGCCTCTGATTTCAGAGGTTTTTGAGGGTCGAAAAGCTTCAGTTGTTGCATATGGAGCTCGAGGCAGCGGAAAGACCTATGCAATTCAGGGTTCTGAAGAGAAACATGGGTTAGCAACCCTTGCATTTGCAGAAATTCTCGCAAAGGCAAAGGAAGTTGGAAATTCAGTTACAGTGTCATCATATGAGGTCTTTCAAGACCGTGTTTATGATCTTTTGGACTCCAAGCATACTGAGGTTCAAGTGTTGGAAGACTCTCGTTGCAAAATAAAACTTAAAGGGCTTTCTCGGGTCTCTATCAAATCCGTGTCTGAATTTTACAAGTTATACTATACTGCGTCTGGTTCATGTAAGCCAGGGCTGAAAGCTTCAATTGAACTACCACGAAGGAGCCACAAGGGTTTGATGATAAACCTGTTGTCATGTGATGAAAACTCAAATATGAAGCTTGTGGGCAAGATGAATTTTGTTGATTTAGCAGGATACGAAGATTCAAAAAGAAATAGTATTGATGGTAGCAATCTTGTAGAGAGTACTAGGATAAACAAGTCATTATATGCATTACAAAATGTGGTTTATGCCCTCAATGCCAATGAAATCCGTGTCCCATACCGGGAAAGCAAACTCACCCGGGTTTTGCAAGATTCCCTCGGGGATAGGAATCATGTCTTGATGCTTACGTGCTTGAATCCATCTTTTTGCCAAGACACAATTTACGCATTAAGTTTAGCATCAAGGTCATGTCGAAGTAACAATATGGTTTTCGCTGATTCCACAAAGAAGATTAAGAGTTCAGGCAAACGAGCAGTGCTTTCATCATTTAAAAATGGGAAACCTGCAACTGTTTCCGCGAGTACAAAGAAGCAAACCAACTTACGAGTTCATCTCGCTGAAAAGAAAACTGGATCTGTGGCGAATGCAAGGAAACTGTTTGTTGATGGAAATCCAGTAGTCAGTTGTAAGCAGGGAGAGTCCCAACCAGACACTGCTTCAGCCATTCAGCAGGATGTTGCTTCAGTCATTGAAGAATCTTCTTTACGAGAAGAGGAAAGCTCCATTTCAGATGTTTCTTCCGCTATAAAACCTAGAGAAGATGAATCAATGTTACCAAGTGCCAACAAAGGGACAGAACCTACCATCACAATACAGAAGGATGTTTCTTCGAGGAGCGAAAACAACCAGGTAGAAGCTCCTTCGAGTATTAATAGTGACATGAAAGCAATGACTCTTTCAGAAGATGGCGACAACTTAGAAAAGAAGAACCAAAATTCACTCATTGTTGGAGATGGGTCACCTCCATTAAGTGTGAGACTTAGAGAAATATCAAACAACTTGAAGTCCTTAATCTCTACTCCTTCATGTGTAAAGGCACCCCAAGGCGTGGATACGTGTTCTTCTAATGTTGTAGAGCCAATAACCCATTTGAGAGTTGATGATAAATGGGAAGCTGCGAAAATTGCTAGTCCTTGGGAAACTTTTAGTGTACGCAGCTCAAGAATGAAGCATTCTCTTGTTCAAGATTGCGTTAAGTTTTTTAATTCTGCTTCCAAGGAAGAGTTGAAAATGTTGAAGGGTATTGGGGAGAAGAGAGCTACCTACATTCTTGAACTTCGCGAAGAATCCCCTGAACCTTTCAAGAGCATCGAAGATTTGAAGGAAATAGGCCTTTCAGTGAAGCAGGTAAGTTAA

Network for GWHGAAZE033784

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.24	Kinesin	54	329	3.30E-61
PF12836.8	HHH_3	595	637	6.00E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K10403	KIF22	Progesterone-mediated oocyte maturation	map04914

Gene Ontology

GO term	Ontology	Name
GO:0007018	biological_process	microtubule-based movement
GO:0003777	molecular_function	microtubule motor activity
GO:0005524	molecular_function	ATP binding
GO:0008017	molecular_function	microtubule binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.436
	SRR3591706	second leaf	0.071
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	1.290
	SRR3591709	Stem	0.238
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	4.208
	SRR8316896	Juvenile bud stage	4.051
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	1.664
	SRR8316900	Third green stage	2.662
	SRR8316901	Third green stage	1.811
	SRR8316898	Complete white stage	0.319
	SRR8316899	Complete white stage	2.114
	SRR8316903	Complete white stage	0.405
	SRR8316902	Silver flowering stage	0.250
	SRR8316904	Silver flowering stage	0.637
	SRR8316905	Silver flowering stage	0.222
	SRR8316906	Gold flowering stage	0.419
	SRR8316907	Gold flowering stage	0.400
	SRR8316908	Gold flowering stage	0.139
SRP132670	SRR6706286	Control	1.049
	SRR6706287	Light intensity 50%	1.254
	SRR6706288	Light intensity 20%	1.405
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.620
	CNS0095593	Slightly white alabastrum(diploid) 2	1.897
	CNS0095594	Slightly white alabastrum(diploid) 3	1.434
	CNS0095595	Whole white alabastrum(diploid) 2	1.210
	CNS0095596	Whole white alabastrum(diploid) 3	1.326
	CNS0095597	Whole white alabastrum(diploid) 4	0.671
	CNS0095598	Silvery flower (diploied) 1	1.227
	CNS0095599	Silvery flower (diploied) 2	1.449
	CNS0095600	Silvery flower (diploied) 3	1.424
	CNS0095601	Golden flower (diploid) 1	1.373
	CNS0095602	Golden flower (diploid) 2	0.673
	CNS0095603	Golden flower (diploid) 3	0.936
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.361
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.878
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.545
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.419
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.012
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.969
	CNS0095610	Silvery flower (tetraploid) 1	0.931
	CNS0095611	Silvery flower (tetraploid) 2	0.730
	CNS0095612	Silvery flower (tetraploid) 3	0.492
	CNS0095613	Golden flower (tetraploid) 1	0.429
	CNS0095614	Golden flower (tetraploid) 2	0.464
	CNS0095615	Golden flower (tetraploid) 3	0.109
CRA001975	CRR073297	Stem 1	3.084
	CRR073298	Stem 2	2.173
	CRR073299	Stem 3	2.690
	CRR073300	Leaf 1	0.931
	CRR073301	Leaf 2	1.270
	CRR073302	Leaf 3	0.879
	CRR073303	Juvenile bud 1	0.952
	CRR073304	Juvenile bud 2	0.238
	CRR073305	Juvenile bud 3	0.809
	CRR073306	Third green 1	0.042
	CRR073307	Third green 2	0.031
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.477
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.074
	CRR073312	Silver flowering 1	0.074
	CRR073313	Silver flowering 2	0.226
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.113
	CRR073316	Gold flowering 2	0.871
	CRR073317	Gold flowering 3	0.414
	CRR073318	Tawny withering 1	2.806
	CRR073319	Tawny withering 2	2.368
	CRR073320	Tawny withering 3	4.469