Gene detail

Detail information of GWHGAAZE033712

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011091638.1	2.6352E-145	PREDICTED: probable transcription factor PosF21 [Sesamum indicum]
Swissprot	tr\|Q04088\|POF21_ARATH	5E-106	Probable transcription factor PosF21
trEMBL	tr\|R9WX23\|R9WX23_CAMSI	1E-143	BZIP transcription factor family protein 11 {ECO:0000313\|EMBL:AGO05995.1}
TAIR10	AT1G06070.1	1E-96	Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000122	gene	330894	334849	+
GWHAAZE00000122	mRNA	330894	334849	+
GWHAAZE00000122	exon	330894	331579	+
GWHAAZE00000122	exon	333670	333802	+
GWHAAZE00000122	exon	334682	334849	+
GWHAAZE00000122	CDS	330894	331579	+
GWHAAZE00000122	CDS	333670	333802	+
GWHAAZE00000122	CDS	334682	334849	+

Transcript Sequence
>GWHTAAZE033752 ATGGAGAAGGATAAATCTCAAAATCAAGCTGGAAGCTTACTGCCTCCTTCGGGGAGGCATTCGAGTTTTTCACCTCAAAATGGGAATTTCGACATGAAATTGGAGCCTGTAGGTTCAACTAAATTGCCTCCATTGGGACCTGGGAGTACTTCAACAGATTCTTCTTGTTTTGGCCAAAAGATGTCGGCGGATTCTAGCCGTTTTAGTCATGACATTAGCTTAATGCCGGACAACCCGCCAAAGCATTCGGGTCATCGACGTGCCCATTCGGAAATTCTCAGCCTTCCTGATGACATTAGCTTCGATAGCGATCTTGGGGTTGTGGGTGGTTTCGATGGACCTTCGTATTCGGATGACACTGAAGAGGATTTGTTTTCCATGTACCTTGATATGGAAAAATTCAATTCTTCATCTGCAACATCTGCCATTCAAGAAGGCGAGCCATCCTCCTCCGCAGCAGCTCCGGCAGCAGCAACACCTCCGTCGGAGAATGTGGGCCCTGCTTCTAGTGAGAAGCCTGCTAGAATTAGACATCAGCATAGCCAGTCCATGGACGGGTCGACTACAATTAAGCAAGAGATGCTTCTAGGACCGGAAGAAACATCTGCTGCTGGTGGGCTTAAGAAGTCCATGTCTTCTACGAAGCTTTCCGAGCTTGCACTTGTTGATCCAAAGCGGGCTAAGAGGATATTGGCAAATAGGCAGTCAGCAGCAAGGTCGAAGGAAAGGAAGATGAGGTACATAGCTGAGCTTGAAAGGAAAGTCCAGACTCTTCAAACTGAAGGAACTACATTGTCTGCTCAATTGAGCCTTTTACAGAGAGATACAAATGGTCTGGCTGCTGAAAATAGTGAACTGAAACTGCGTTTGCAAACTATGGAACAGCAAGTTAACTTGCAAGATGGTAAGGATCTGAACACTTCATGGTTATTGTTTTTCTCTTTAAACCACCACCTCCTCCCCCTCTCCTCTCTTCTGTTTCCATAG

Network for GWHGAAZE033712

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00170.22	bZIP_1	225	279	2.70E-09

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	5.784
	SRR3591706	second leaf	4.647
	SRR3591707	mature leaf	1.724
	SRR3591708	Shoot apex	4.031
	SRR3591709	Stem	11.441
	SRR3591710	White floral bud	13.458
	SRR3591711	White flower	12.328
	SRR3591712	Green floral bud	18.170
	SRR3591713	Yellow flower	7.378
SRP173429	SRR8316895	Juvenile bud stage	9.092
	SRR8316896	Juvenile bud stage	13.610
	SRR8316897	Juvenile bud stage	5.309
	SRR8316894	Third green stage	5.653
	SRR8316900	Third green stage	18.466
	SRR8316901	Third green stage	16.466
	SRR8316898	Complete white stage	23.587
	SRR8316899	Complete white stage	23.081
	SRR8316903	Complete white stage	43.814
	SRR8316902	Silver flowering stage	11.549
	SRR8316904	Silver flowering stage	13.714
	SRR8316905	Silver flowering stage	9.416
	SRR8316906	Gold flowering stage	16.688
	SRR8316907	Gold flowering stage	19.832
	SRR8316908	Gold flowering stage	13.558
SRP132670	SRR6706286	Control	10.016
	SRR6706287	Light intensity 50%	11.611
	SRR6706288	Light intensity 20%	11.504
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	15.572
	CNS0095593	Slightly white alabastrum(diploid) 2	12.713
	CNS0095594	Slightly white alabastrum(diploid) 3	13.136
	CNS0095595	Whole white alabastrum(diploid) 2	12.850
	CNS0095596	Whole white alabastrum(diploid) 3	12.989
	CNS0095597	Whole white alabastrum(diploid) 4	13.366
	CNS0095598	Silvery flower (diploied) 1	10.519
	CNS0095599	Silvery flower (diploied) 2	11.361
	CNS0095600	Silvery flower (diploied) 3	37.657
	CNS0095601	Golden flower (diploid) 1	12.883
	CNS0095602	Golden flower (diploid) 2	20.499
	CNS0095603	Golden flower (diploid) 3	18.870
	CNS0095604	Slightly white alabastrum(tetraploid) 1	12.049
	CNS0095605	Slightly white alabastrum(tetraploid) 2	12.103
	CNS0095606	Slightly white alabastrum(tetraploid) 3	11.203
	CNS0095607	Whole white alabastrum(tetraploid) 1	13.317
	CNS0095608	Whole white alabastrum(tetraploid) 2	14.229
	CNS0095609	Whole white alabastrum(tetraploid) 3	13.891
	CNS0095610	Silvery flower (tetraploid) 1	28.945
	CNS0095611	Silvery flower (tetraploid) 2	33.933
	CNS0095612	Silvery flower (tetraploid) 3	26.253
	CNS0095613	Golden flower (tetraploid) 1	19.199
	CNS0095614	Golden flower (tetraploid) 2	27.856
	CNS0095615	Golden flower (tetraploid) 3	51.238
CRA001975	CRR073297	Stem 1	14.838
	CRR073298	Stem 2	11.852
	CRR073299	Stem 3	12.423
	CRR073300	Leaf 1	21.330
	CRR073301	Leaf 2	18.562
	CRR073302	Leaf 3	13.110
	CRR073303	Juvenile bud 1	18.328
	CRR073304	Juvenile bud 2	25.424
	CRR073305	Juvenile bud 3	14.750
	CRR073306	Third green 1	23.083
	CRR073307	Third green 2	12.620
	CRR073308	Third green 3	16.114
	CRR073309	Second white 1	13.445
	CRR073310	Second white 2	15.317
	CRR073311	Second white 3	11.960
	CRR073312	Silver flowering 1	8.555
	CRR073313	Silver flowering 2	7.295
	CRR073314	Silver flowering 3	6.246
	CRR073315	Gold flowering 1	1.669
	CRR073316	Gold flowering 2	1.025
	CRR073317	Gold flowering 3	1.917
	CRR073318	Tawny withering 1	4.759
	CRR073319	Tawny withering 2	5.619
	CRR073320	Tawny withering 3	4.873