Detail information of GWHGAAZE033699


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007014251.10AP2-like ethylene-responsive transcription factor AIL5, putative [Theobroma cacao]
Swissprottr|Q6PQQ3|AIL5_ARATH3E-145AP2-like ethylene-responsive transcription factor AIL5
trEMBLtr|A0A061GPU4|A0A061GPU4_THECC0AP2-like ethylene-responsive transcription factor AIL5, putative {ECO:0000313|EMBL:EOY31870.1}
TAIR10AT5G57390.17E-108AINTEGUMENTA-like 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000115gene782279789850-
GWHAAZE00000115mRNA782279789850-
GWHAAZE00000115exon789650789850-
GWHAAZE00000115exon788315788657-
GWHAAZE00000115exon787131787213-
GWHAAZE00000115exon784961785049-
GWHAAZE00000115exon784711784784-
GWHAAZE00000115exon784257784307-
GWHAAZE00000115exon784078784154-
GWHAAZE00000115exon782279782967-
GWHAAZE00000115five_prime_UTR789768789850-
GWHAAZE00000115CDS789650789767-
GWHAAZE00000115CDS788315788657-
GWHAAZE00000115CDS787131787213-
GWHAAZE00000115CDS784961785049-
GWHAAZE00000115CDS784711784784-
GWHAAZE00000115CDS784257784307-
GWHAAZE00000115CDS784078784154-
GWHAAZE00000115CDS782279782967-
Transcript Sequence

Network for GWHGAAZE033699

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.21AP21482039.60E-10
PF00847.21AP22472973.40E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-AP2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding
GO:0003700molecular_functionDNA-binding transcription factor activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.576
SRR3591706second leaf0.587
SRR3591707mature leaf0.121
SRR3591708Shoot apex3.990
SRR3591709Stem1.357
SRR3591710White floral bud0.157
SRR3591711White flower0.008
SRR3591712Green floral bud1.309
SRR3591713Yellow flower0.089
SRP173429 SRR8316895Juvenile bud stage 4.136
SRR8316896Juvenile bud stage 3.044
SRR8316897Juvenile bud stage 0.087
SRR8316894Third green stage 0.955
SRR8316900Third green stage 0.271
SRR8316901Third green stage 0.267
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.200
SRR8316903Complete white stage 0.064
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.292
SRR6706287Light intensity 50%0.403
SRR6706288Light intensity 20%0.326
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.020
CNS0095593Slightly white alabastrum(diploid) 21.601
CNS0095594Slightly white alabastrum(diploid) 31.669
CNS0095595Whole white alabastrum(diploid) 20.885
CNS0095596Whole white alabastrum(diploid) 30.354
CNS0095597Whole white alabastrum(diploid) 40.458
CNS0095598Silvery flower (diploied) 10.953
CNS0095599Silvery flower (diploied) 20.089
CNS0095600Silvery flower (diploied) 30.036
CNS0095601Golden flower (diploid) 10.673
CNS0095602Golden flower (diploid) 20.139
CNS0095603Golden flower (diploid) 30.219
CNS0095604Slightly white alabastrum(tetraploid) 10.462
CNS0095605Slightly white alabastrum(tetraploid) 20.255
CNS0095606Slightly white alabastrum(tetraploid) 30.351
CNS0095607Whole white alabastrum(tetraploid) 10.027
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.011
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.049
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 17.909
CRR073298Stem 25.586
CRR073299Stem 38.302
CRR073300Leaf 11.002
CRR073301Leaf 21.111
CRR073302Leaf 30.825
CRR073303Juvenile bud 10.174
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.215
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.215
CRR073316Gold flowering 20.130
CRR073317Gold flowering 30.174
CRR073318Tawny withering 11.768
CRR073319Tawny withering 22.209
CRR073320Tawny withering 32.191