Detail information of GWHGAAZE033300


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011098787.10PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] [Sesamum indicum]
COGYP_002429661.19E-37glycerol-3-phosphate dehydrogenase (NAD(P)(+))
Swissprottr|P52425|GPDA_CUPLA0Glycerol-3-phosphate dehydrogenase [NAD(+)]
trEMBLtr|A0A067LNE6|A0A067LNE6_JATCU0Glycerol-3-phosphate dehydrogenase [NAD(+)] {ECO:0000256|RuleBase:RU361243}
TAIR10AT5G40610.17E-168NAD-dependent glycerol-3-phosphate dehydrogenase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene44317044434332-
GWHAAZE00000094mRNA44317044434332-
GWHAAZE00000094exon44341404434332-
GWHAAZE00000094exon44338914433967-
GWHAAZE00000094exon44337224433794-
GWHAAZE00000094exon44333864433603-
GWHAAZE00000094exon44331994433306-
GWHAAZE00000094exon44329014432964-
GWHAAZE00000094exon44327654432802-
GWHAAZE00000094exon44325344432654-
GWHAAZE00000094exon44323754432429-
GWHAAZE00000094exon44322434432291-
GWHAAZE00000094exon44317044432110-
GWHAAZE00000094CDS44341404434332-
GWHAAZE00000094CDS44338914433967-
GWHAAZE00000094CDS44337224433794-
GWHAAZE00000094CDS44333864433603-
GWHAAZE00000094CDS44331994433306-
GWHAAZE00000094CDS44329014432964-
GWHAAZE00000094CDS44327654432802-
GWHAAZE00000094CDS44325344432654-
GWHAAZE00000094CDS44323754432429-
GWHAAZE00000094CDS44322434432291-
GWHAAZE00000094CDS44319044432110-
GWHAAZE00000094three_prime_UTR44317044431903-
Transcript Sequence

Network for GWHGAAZE033300

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01210.24NAD_Gly3P_dh_N372039.90E-46
PF07479.15NAD_Gly3P_dh_C2263721.80E-46
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00006GPD1 Biosynthesis of secondary metabolites map01110
Glycerophospholipid metabolismmap00564
MAPK signaling pathway - yeastmap04011

Gene Ontology

GO term OntologyName
GO:0046168biological_processglycerol-3-phosphate catabolic process
GO:0055114biological_processoxidation-reduction process
GO:0006072biological_processglycerol-3-phosphate metabolic process
GO:0005975biological_processcarbohydrate metabolic process
GO:0009331cellular_componentglycerol-3-phosphate dehydrogenase complex
GO:0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287molecular_functionNAD binding
GO:0004367molecular_functionglycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0016491molecular_functionoxidoreductase activity
GO:0042803molecular_functionprotein homodimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.106
SRR3591706second leaf1.433
SRR3591707mature leaf1.406
SRR3591708Shoot apex0.419
SRR3591709Stem0.020
SRR3591710White floral bud1.994
SRR3591711White flower0.575
SRR3591712Green floral bud20.724
SRR3591713Yellow flower2.832
SRP173429 SRR8316895Juvenile bud stage 1.947
SRR8316896Juvenile bud stage 7.464
SRR8316897Juvenile bud stage 5.850
SRR8316894Third green stage 3.697
SRR8316900Third green stage 16.233
SRR8316901Third green stage 18.786
SRR8316898Complete white stage 0.107
SRR8316899Complete white stage 0.243
SRR8316903Complete white stage 0.089
SRR8316902Silver flowering stage0.004
SRR8316904Silver flowering stage0.178
SRR8316905Silver flowering stage0.017
SRR8316906Gold flowering stage 0.407
SRR8316907Gold flowering stage 0.099
SRR8316908Gold flowering stage 0.184
SRP132670SRR6706286Control8.240
SRR6706287Light intensity 50%8.946
SRR6706288Light intensity 20%7.403
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.504
CNS0095593Slightly white alabastrum(diploid) 210.334
CNS0095594Slightly white alabastrum(diploid) 316.255
CNS0095595Whole white alabastrum(diploid) 220.911
CNS0095596Whole white alabastrum(diploid) 329.626
CNS0095597Whole white alabastrum(diploid) 422.344
CNS0095598Silvery flower (diploied) 10.416
CNS0095599Silvery flower (diploied) 20.647
CNS0095600Silvery flower (diploied) 30.473
CNS0095601Golden flower (diploid) 10.703
CNS0095602Golden flower (diploid) 20.949
CNS0095603Golden flower (diploid) 30.733
CNS0095604Slightly white alabastrum(tetraploid) 126.415
CNS0095605Slightly white alabastrum(tetraploid) 224.004
CNS0095606Slightly white alabastrum(tetraploid) 30.008
CNS0095607Whole white alabastrum(tetraploid) 135.021
CNS0095608Whole white alabastrum(tetraploid) 228.446
CNS0095609Whole white alabastrum(tetraploid) 323.808
CNS0095610Silvery flower (tetraploid) 11.132
CNS0095611Silvery flower (tetraploid) 21.285
CNS0095612Silvery flower (tetraploid) 31.224
CNS0095613Golden flower (tetraploid) 10.794
CNS0095614Golden flower (tetraploid) 21.063
CNS0095615Golden flower (tetraploid) 30.960
CRA001975CRR073297Stem 13.687
CRR073298Stem 24.470
CRR073299Stem 33.974
CRR073300Leaf 17.609
CRR073301Leaf 28.101
CRR073302Leaf 34.253
CRR073303Juvenile bud 14.493
CRR073304Juvenile bud 24.683
CRR073305Juvenile bud 30.001
CRR073306Third green 10.534
CRR073307Third green 20.361
CRR073308Third green 30.402
CRR073309Second white 10.501
CRR073310Second white 20.681
CRR073311Second white 30.433
CRR073312Silver flowering 11.031
CRR073313Silver flowering 21.533
CRR073314Silver flowering 31.301
CRR073315Gold flowering 10.132
CRR073316Gold flowering 20.248
CRR073317Gold flowering 30.169
CRR073318Tawny withering 10.098
CRR073319Tawny withering 20.315
CRR073320Tawny withering 30.473