Detail information of GWHGAAZE033244


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004141086.10PREDICTED: protein SAMHD1 homolog [Cucumis sativus]
COGYP_073870.14E-30hypothetical protein STH41
Swissprottr|Q2MHE4|HT1_ARATH4E-52Serine/threonine-protein kinase HT1
trEMBLtr|A0A0A0LFH1|A0A0A0LFH1_CUCSA0Uncharacterized protein {ECO:0000313|EMBL:KGN59664.1}
TAIR10AT5G40270.17E-174HD domain-containing metal-dependent phosphohydrolase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene34982143517636-
GWHAAZE00000094mRNA34982143517636-
GWHAAZE00000094exon34982143498679-
GWHAAZE00000094exon34988313498965-
GWHAAZE00000094exon34991433499317-
GWHAAZE00000094exon34994613499657-
GWHAAZE00000094exon35006373500724-
GWHAAZE00000094exon35014483501531-
GWHAAZE00000094exon35097023509802-
GWHAAZE00000094exon35098973510007-
GWHAAZE00000094exon35102023510217-
GWHAAZE00000094exon35103793510470-
GWHAAZE00000094exon35105753510655-
GWHAAZE00000094exon35109603511052-
GWHAAZE00000094exon35111923511265-
GWHAAZE00000094exon35113493511404-
GWHAAZE00000094exon35115043511566-
GWHAAZE00000094exon35116733511740-
GWHAAZE00000094exon35119333511971-
GWHAAZE00000094exon35128703512960-
GWHAAZE00000094exon35134333513517-
GWHAAZE00000094exon35136023513653-
GWHAAZE00000094exon35137423513848-
GWHAAZE00000094exon35159123515934-
GWHAAZE00000094exon35171833517327-
GWHAAZE00000094exon35174743517636-
GWHAAZE00000094five_prime_UTR35174743517636-
GWHAAZE00000094five_prime_UTR35172573517327-
GWHAAZE00000094CDS35171833517256-
GWHAAZE00000094CDS35159123515934-
GWHAAZE00000094CDS35137423513848-
GWHAAZE00000094CDS35136023513653-
GWHAAZE00000094CDS35134333513517-
GWHAAZE00000094CDS35128703512960-
GWHAAZE00000094CDS35119333511971-
GWHAAZE00000094CDS35116733511740-
GWHAAZE00000094CDS35115043511566-
GWHAAZE00000094CDS35113493511404-
GWHAAZE00000094CDS35111923511265-
GWHAAZE00000094CDS35109603511052-
GWHAAZE00000094CDS35105753510655-
GWHAAZE00000094CDS35103793510470-
GWHAAZE00000094CDS35102023510217-
GWHAAZE00000094CDS35098973510007-
GWHAAZE00000094CDS35097023509802-
GWHAAZE00000094CDS35014483501531-
GWHAAZE00000094CDS35006373500724-
GWHAAZE00000094CDS34994613499657-
GWHAAZE00000094CDS34991433499317-
GWHAAZE00000094CDS34988313498965-
GWHAAZE00000094CDS34984733498679-
GWHAAZE00000094three_prime_UTR34982143498472-
Transcript Sequence

Network for GWHGAAZE033244

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01966.23HD461855.10E-14
PF07714.18PK_Tyr_Ser-Thr4456745.10E-57
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.351
SRR3591706second leaf8.510
SRR3591707mature leaf4.311
SRR3591708Shoot apex17.852
SRR3591709Stem6.133
SRR3591710White floral bud5.682
SRR3591711White flower3.234
SRR3591712Green floral bud20.802
SRR3591713Yellow flower1.289
SRP173429 SRR8316895Juvenile bud stage 15.382
SRR8316896Juvenile bud stage 25.420
SRR8316897Juvenile bud stage 10.813
SRR8316894Third green stage 12.706
SRR8316900Third green stage 33.671
SRR8316901Third green stage 30.192
SRR8316898Complete white stage 2.829
SRR8316899Complete white stage 26.659
SRR8316903Complete white stage 4.546
SRR8316902Silver flowering stage1.345
SRR8316904Silver flowering stage1.188
SRR8316905Silver flowering stage0.607
SRR8316906Gold flowering stage 1.277
SRR8316907Gold flowering stage 1.736
SRR8316908Gold flowering stage 1.246
SRP132670SRR6706286Control19.961
SRR6706287Light intensity 50%22.573
SRR6706288Light intensity 20%24.704
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.933
CNS0095593Slightly white alabastrum(diploid) 233.199
CNS0095594Slightly white alabastrum(diploid) 325.404
CNS0095595Whole white alabastrum(diploid) 223.696
CNS0095596Whole white alabastrum(diploid) 328.553
CNS0095597Whole white alabastrum(diploid) 423.950
CNS0095598Silvery flower (diploied) 15.708
CNS0095599Silvery flower (diploied) 26.634
CNS0095600Silvery flower (diploied) 33.154
CNS0095601Golden flower (diploid) 16.909
CNS0095602Golden flower (diploid) 23.747
CNS0095603Golden flower (diploid) 33.823
CNS0095604Slightly white alabastrum(tetraploid) 125.151
CNS0095605Slightly white alabastrum(tetraploid) 225.933
CNS0095606Slightly white alabastrum(tetraploid) 342.193
CNS0095607Whole white alabastrum(tetraploid) 112.811
CNS0095608Whole white alabastrum(tetraploid) 218.975
CNS0095609Whole white alabastrum(tetraploid) 322.105
CNS0095610Silvery flower (tetraploid) 13.177
CNS0095611Silvery flower (tetraploid) 23.456
CNS0095612Silvery flower (tetraploid) 31.424
CNS0095613Golden flower (tetraploid) 10.970
CNS0095614Golden flower (tetraploid) 21.871
CNS0095615Golden flower (tetraploid) 30.233
CRA001975CRR073297Stem 121.438
CRR073298Stem 222.639
CRR073299Stem 318.787
CRR073300Leaf 126.060
CRR073301Leaf 224.653
CRR073302Leaf 322.352
CRR073303Juvenile bud 119.965
CRR073304Juvenile bud 26.606
CRR073305Juvenile bud 317.306
CRR073306Third green 10.224
CRR073307Third green 20.304
CRR073308Third green 30.601
CRR073309Second white 10.092
CRR073310Second white 20.100
CRR073311Second white 30.027
CRR073312Silver flowering 10.062
CRR073313Silver flowering 20.057
CRR073314Silver flowering 30.011
CRR073315Gold flowering 13.101
CRR073316Gold flowering 23.911
CRR073317Gold flowering 32.842
CRR073318Tawny withering 14.545
CRR073319Tawny withering 23.655
CRR073320Tawny withering 34.600