Detail information of GWHGAAZE033194


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007037195.10H(+)-transporting atpase plant/fungi plasma membrane type [Theobroma cacao]
COGYP_006722443.10cation-translocating P-type ATPase
Swissprottr|Q03194|PMA4_NICPL0Plasma membrane ATPase 4
trEMBLtr|A0A061FWS9|A0A061FWS9_THECC0H(+)-transporting atpase plant/fungi plasma membrane type {ECO:0000313|EMBL:EOY21696.1}
TAIR10AT5G62670.10H(+)-ATPase 11

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene27575292765100-
GWHAAZE00000094mRNA27575292765100-
GWHAAZE00000094exon27575292757625-
GWHAAZE00000094exon27579262758101-
GWHAAZE00000094exon27582012758383-
GWHAAZE00000094exon27584912758676-
GWHAAZE00000094exon27591412759581-
GWHAAZE00000094exon27597622759794-
GWHAAZE00000094exon27598832760121-
GWHAAZE00000094exon27603122760476-
GWHAAZE00000094exon27617432761887-
GWHAAZE00000094exon27620002762104-
GWHAAZE00000094exon27621902762312-
GWHAAZE00000094exon27624442762563-
GWHAAZE00000094exon27626462762765-
GWHAAZE00000094exon27628492763055-
GWHAAZE00000094exon27632622763441-
GWHAAZE00000094exon27635352763669-
GWHAAZE00000094exon27640402764177-
GWHAAZE00000094exon27643432764441-
GWHAAZE00000094exon27648382764957-
GWHAAZE00000094exon27650472765100-
GWHAAZE00000094CDS27650472765100-
GWHAAZE00000094CDS27648382764957-
GWHAAZE00000094CDS27643432764441-
GWHAAZE00000094CDS27640402764177-
GWHAAZE00000094CDS27635352763669-
GWHAAZE00000094CDS27632622763441-
GWHAAZE00000094CDS27628492763055-
GWHAAZE00000094CDS27626462762765-
GWHAAZE00000094CDS27624442762563-
GWHAAZE00000094CDS27621902762312-
GWHAAZE00000094CDS27620002762104-
GWHAAZE00000094CDS27617432761887-
GWHAAZE00000094CDS27603122760476-
GWHAAZE00000094CDS27598832760121-
GWHAAZE00000094CDS27597622759794-
GWHAAZE00000094CDS27591412759581-
GWHAAZE00000094CDS27584912758676-
GWHAAZE00000094CDS27582012758383-
GWHAAZE00000094CDS27579262758101-
GWHAAZE00000094CDS27575292757625-
Transcript Sequence

Network for GWHGAAZE033194

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00690.27Cation_ATPase_N20832.80E-12
PF00122.21E1-E2_ATPase1323101.40E-46
PF00702.27Hydrolase3276046.30E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01535PMA1, PMA2 Metabolic pathways map01100
Oxidative phosphorylationmap00190

Gene Ontology

GO term OntologyName
GO:0120029biological_processproton export across plasma membrane
GO:0016021cellular_componentintegral component of membrane
GO:0008553molecular_functionproton-exporting ATPase activity, phosphorylative mechanism
GO:0000166molecular_functionnucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.658
SRR3591706second leaf5.762
SRR3591707mature leaf12.224
SRR3591708Shoot apex3.407
SRR3591709Stem21.955
SRR3591710White floral bud21.090
SRR3591711White flower27.153
SRR3591712Green floral bud9.266
SRR3591713Yellow flower18.718
SRP173429 SRR8316895Juvenile bud stage 2.602
SRR8316896Juvenile bud stage 3.433
SRR8316897Juvenile bud stage 1.550
SRR8316894Third green stage 2.008
SRR8316900Third green stage 4.546
SRR8316901Third green stage 4.905
SRR8316898Complete white stage 6.321
SRR8316899Complete white stage 13.254
SRR8316903Complete white stage 16.148
SRR8316902Silver flowering stage3.552
SRR8316904Silver flowering stage4.514
SRR8316905Silver flowering stage1.415
SRR8316906Gold flowering stage 4.482
SRR8316907Gold flowering stage 4.102
SRR8316908Gold flowering stage 5.806
SRP132670SRR6706286Control11.532
SRR6706287Light intensity 50%10.950
SRR6706288Light intensity 20%10.405
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.186
CNS0095593Slightly white alabastrum(diploid) 27.170
CNS0095594Slightly white alabastrum(diploid) 37.507
CNS0095595Whole white alabastrum(diploid) 26.594
CNS0095596Whole white alabastrum(diploid) 35.998
CNS0095597Whole white alabastrum(diploid) 46.591
CNS0095598Silvery flower (diploied) 111.729
CNS0095599Silvery flower (diploied) 210.766
CNS0095600Silvery flower (diploied) 321.136
CNS0095601Golden flower (diploid) 17.826
CNS0095602Golden flower (diploid) 219.600
CNS0095603Golden flower (diploid) 319.323
CNS0095604Slightly white alabastrum(tetraploid) 15.395
CNS0095605Slightly white alabastrum(tetraploid) 27.125
CNS0095606Slightly white alabastrum(tetraploid) 318.244
CNS0095607Whole white alabastrum(tetraploid) 17.665
CNS0095608Whole white alabastrum(tetraploid) 27.457
CNS0095609Whole white alabastrum(tetraploid) 310.668
CNS0095610Silvery flower (tetraploid) 116.994
CNS0095611Silvery flower (tetraploid) 219.787
CNS0095612Silvery flower (tetraploid) 313.439
CNS0095613Golden flower (tetraploid) 14.946
CNS0095614Golden flower (tetraploid) 212.678
CNS0095615Golden flower (tetraploid) 314.819
CRA001975CRR073297Stem 18.282
CRR073298Stem 25.792
CRR073299Stem 38.276
CRR073300Leaf 112.348
CRR073301Leaf 210.545
CRR073302Leaf 310.921
CRR073303Juvenile bud 115.939
CRR073304Juvenile bud 214.144
CRR073305Juvenile bud 340.735
CRR073306Third green 16.489
CRR073307Third green 25.684
CRR073308Third green 38.343
CRR073309Second white 15.451
CRR073310Second white 24.874
CRR073311Second white 35.051
CRR073312Silver flowering 12.282
CRR073313Silver flowering 24.107
CRR073314Silver flowering 34.054
CRR073315Gold flowering 16.068
CRR073316Gold flowering 27.446
CRR073317Gold flowering 37.241
CRR073318Tawny withering 132.965
CRR073319Tawny withering 240.435
CRR073320Tawny withering 332.044