Detail information of GWHGAAZE033143


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003633855.10PREDICTED: vacuolar amino acid transporter 1 [Vitis vinifera]
Swissprottr|Q9FKS8|LHT1_ARATH7E-14Lysine histidine transporter 1
trEMBLtr|D7SXB3|D7SXB3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI22210.3}
TAIR10AT3G28960.13E-116Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene16828891684662-
GWHAAZE00000094mRNA16828891684662-
GWHAAZE00000094exon16828891683404-
GWHAAZE00000094exon16838301684537-
GWHAAZE00000094exon16846511684662-
GWHAAZE00000094CDS16846511684662-
GWHAAZE00000094CDS16838301684537-
GWHAAZE00000094CDS16828891683404-
Transcript Sequence

Network for GWHGAAZE033143

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans324024.90E-64
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.092
SRR3591706second leaf0.891
SRR3591707mature leaf1.039
SRR3591708Shoot apex0.903
SRR3591709Stem0.285
SRR3591710White floral bud5.343
SRR3591711White flower3.039
SRR3591712Green floral bud6.091
SRR3591713Yellow flower2.251
SRP173429 SRR8316895Juvenile bud stage 8.106
SRR8316896Juvenile bud stage 1.752
SRR8316897Juvenile bud stage 7.781
SRR8316894Third green stage 0.452
SRR8316900Third green stage 6.811
SRR8316901Third green stage 5.735
SRR8316898Complete white stage 7.014
SRR8316899Complete white stage 50.302
SRR8316903Complete white stage 9.469
SRR8316902Silver flowering stage25.010
SRR8316904Silver flowering stage37.326
SRR8316905Silver flowering stage20.818
SRR8316906Gold flowering stage 83.937
SRR8316907Gold flowering stage 67.659
SRR8316908Gold flowering stage 97.187
SRP132670SRR6706286Control0.732
SRR6706287Light intensity 50%0.739
SRR6706288Light intensity 20%1.224
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.726
CNS0095593Slightly white alabastrum(diploid) 27.535
CNS0095594Slightly white alabastrum(diploid) 311.400
CNS0095595Whole white alabastrum(diploid) 210.689
CNS0095596Whole white alabastrum(diploid) 310.663
CNS0095597Whole white alabastrum(diploid) 45.520
CNS0095598Silvery flower (diploied) 112.233
CNS0095599Silvery flower (diploied) 225.756
CNS0095600Silvery flower (diploied) 318.296
CNS0095601Golden flower (diploid) 117.531
CNS0095602Golden flower (diploid) 223.717
CNS0095603Golden flower (diploid) 321.293
CNS0095604Slightly white alabastrum(tetraploid) 11.249
CNS0095605Slightly white alabastrum(tetraploid) 21.247
CNS0095606Slightly white alabastrum(tetraploid) 30.348
CNS0095607Whole white alabastrum(tetraploid) 14.014
CNS0095608Whole white alabastrum(tetraploid) 22.676
CNS0095609Whole white alabastrum(tetraploid) 31.765
CNS0095610Silvery flower (tetraploid) 12.370
CNS0095611Silvery flower (tetraploid) 21.955
CNS0095612Silvery flower (tetraploid) 315.439
CNS0095613Golden flower (tetraploid) 15.967
CNS0095614Golden flower (tetraploid) 24.244
CNS0095615Golden flower (tetraploid) 39.843
CRA001975CRR073297Stem 12.805
CRR073298Stem 22.280
CRR073299Stem 31.399
CRR073300Leaf 11.556
CRR073301Leaf 22.021
CRR073302Leaf 31.207
CRR073303Juvenile bud 11.194
CRR073304Juvenile bud 22.991
CRR073305Juvenile bud 30.411
CRR073306Third green 195.113
CRR073307Third green 263.233
CRR073308Third green 356.449
CRR073309Second white 1192.743
CRR073310Second white 2138.048
CRR073311Second white 3133.517
CRR073312Silver flowering 1109.951
CRR073313Silver flowering 2159.093
CRR073314Silver flowering 3133.969
CRR073315Gold flowering 10.364
CRR073316Gold flowering 28.294
CRR073317Gold flowering 38.708
CRR073318Tawny withering 15.860
CRR073319Tawny withering 248.278
CRR073320Tawny withering 32.671