Gene detail

Detail information of GWHGAAZE033057

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011092588.1	6.85461E-90	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 isoform X2 [Sesamum indicum]
COG	YP_001958461.1	0.0000002	hypothetical protein Aasi_1443
Swissprot	tr\|P28493\|PR5_ARATH	1E-58	Pathogenesis-related protein 5 (Precursor)
trEMBL	tr\|A0A022REJ0\|A0A022REJ0_ERYGU	3E-83	Uncharacterized protein {ECO:0000313\|EMBL:EYU38797.1}
TAIR10	AT5G38280.1	5E-69	PR5-like receptor kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000094	gene	66021	68727	-
GWHAAZE00000094	mRNA	66021	68727	-
GWHAAZE00000094	exon	66021	66451	-
GWHAAZE00000094	exon	66776	67219	-
GWHAAZE00000094	exon	67968	68727	-
GWHAAZE00000094	CDS	67968	68727	-
GWHAAZE00000094	CDS	66776	67219	-
GWHAAZE00000094	CDS	66021	66451	-

Transcript Sequence
>GWHTAAZE033096 ATGCATACAACTCTCATTCCTAACTTGTATCTTCATTCAAATCATTTTTCAGGGGTACTCTCATCGACAACATTTACGCTAGTTAACAATTGCAATTACACTATATGGCCAGGCACGTCATTCAAAACTGGCGGTGGACGACTCCCCATCACCGGGCAAATCGGTGGTTTTGTCCTCCACGAAAACGAGTCCACGACTATTGACGCCCCAGAGTCCTCGAATAATGTCGCCCCATGGTCCTGGGCAGCCAGCTTCTGGGGTCGCACCCACTGCACTGGTGACTCCACCGGAAACTTCTCCTGCCTCACCGGCGATTGTGGCTCCGGAATTGGATGTACCGAGTCTGCTGTTCCGCCCGTTACGCTGGCTGAGTTCAATCTTAGCACTGGTACCGATTTTTACGACGTCAGCCTTGTCGATGGGTACAACCTTCCTATGCTGATTATGCCTCAGAGTAGGACCGGAGTCAAATGTAATAACACGGGATGCCTTTCAGACTTGAACCAGGCTTGTCCGTTGGAGTTGAAGGTGACGAGTTCGGGAGGAGAGGGGGTCGCATGCAAGAGCCCGTGCAAGGCGTTTGGGACTGCAGAGTACTGTTGCAATAGTGGTACATGCAAGCCGACTTCCTACTCAGAGTATTTCAAGAAGGCGTGCCCAAGCGCTCTCAGTTCTGCGTTTGTTGACGAGACCAGCACCTTCAGCTGTGCTGGCGCGGATTACCTAATCACCTTCTGCCCATCCGCCACTGAGGTAGCCGTTCTTGGTGGAGGAATAGCGGCGCTCTCAATTTTGAGTTATTTGATTTTCCGGCGATGGCGGAAATCTGGTTTAAAGGACACCAAGTTGGACCTAAGCGAGCCCACCAAGTTGAGCGCTTCGTTCCTACCATCAGATATTCGGCGCTTTTCACTTGCCGAAATCAAATCTGGTACTAACAACTTTGACGACAATCTTGTGCTCGGTGTTGGAGGATTTGGCAAGGTGTATAAAGGTTGTATAGACAACAATGCAACCACCGTTGCGATCAAGCGGTTGAACGCTATGTCTCATCAAGGTATTCGGGAGTTTAAAACAGAGATCGAAATGCTATCCAAACTACGACATCTTCATCTCGTGTCCTTAGTTGGATGCTGTGAGGATAATGGGGAAATGGTATTGGTGTATGATTATATGGGTAACGGTACCTTACGGTCCCATCTTTTGTTGTCTGGTAAGCCAGCAATTATTGAAGACATACCTGAGGAGCCGGTGAATTTGGCCAATTGGGCTCGTTGCTGTTATAAAACAAGGGCCCTTGATGAAATTATTGATCTTCATGTACGGGACGAGATTGCACCAGAGTGTTTAAAGAAGTTTGCCGATGTAGCTTATAGCTGCATCGAAGAACAAGGGATCAATCGACCGTCGATGAGTGACGTGGTTTGGAGTCTAGAGCTTGCATTGCAACTTCAAGAGGCTGCTGAGAATATGAGTGCTAATGGAGATGCGCTTGAGAACTTTGAAAATTTCACCAATCTACCTTTCCATCTTGGAGAGGATGCCTCAACAGAGCATAGTAGTGAGAGCTTGTCTAGGTCGATTGAATTAGTAGGCAGCTCTAGAAGTAGTGTCTCATCACTGACTACTGAGTAG

Network for GWHGAAZE033057

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00314.18	Thaumatin	29	247	3.00E-62
PF07714.18	PK_Tyr_Ser-Thr	320	404	1.50E-16

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	10.797
	SRR3591706	second leaf	1.286
	SRR3591707	mature leaf	3.363
	SRR3591708	Shoot apex	5.356
	SRR3591709	Stem	8.807
	SRR3591710	White floral bud	1.104
	SRR3591711	White flower	2.398
	SRR3591712	Green floral bud	1.824
	SRR3591713	Yellow flower	1.140
SRP173429	SRR8316895	Juvenile bud stage	5.961
	SRR8316896	Juvenile bud stage	7.735
	SRR8316897	Juvenile bud stage	2.378
	SRR8316894	Third green stage	0.852
	SRR8316900	Third green stage	0.710
	SRR8316901	Third green stage	1.139
	SRR8316898	Complete white stage	0.249
	SRR8316899	Complete white stage	2.864
	SRR8316903	Complete white stage	0.637
	SRR8316902	Silver flowering stage	0.244
	SRR8316904	Silver flowering stage	0.254
	SRR8316905	Silver flowering stage	0.199
	SRR8316906	Gold flowering stage	0.856
	SRR8316907	Gold flowering stage	0.354
	SRR8316908	Gold flowering stage	0.319
SRP132670	SRR6706286	Control	1.487
	SRR6706287	Light intensity 50%	2.467
	SRR6706288	Light intensity 20%	1.707
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.052
	CNS0095593	Slightly white alabastrum(diploid) 2	2.330
	CNS0095594	Slightly white alabastrum(diploid) 3	2.975
	CNS0095595	Whole white alabastrum(diploid) 2	1.574
	CNS0095596	Whole white alabastrum(diploid) 3	0.422
	CNS0095597	Whole white alabastrum(diploid) 4	0.545
	CNS0095598	Silvery flower (diploied) 1	1.949
	CNS0095599	Silvery flower (diploied) 2	1.506
	CNS0095600	Silvery flower (diploied) 3	0.897
	CNS0095601	Golden flower (diploid) 1	1.452
	CNS0095602	Golden flower (diploid) 2	1.683
	CNS0095603	Golden flower (diploid) 3	1.866
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.085
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.107
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.410
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.176
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.012
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.149
	CNS0095610	Silvery flower (tetraploid) 1	0.025
	CNS0095611	Silvery flower (tetraploid) 2	0.062
	CNS0095612	Silvery flower (tetraploid) 3	0.053
	CNS0095613	Golden flower (tetraploid) 1	0.023
	CNS0095614	Golden flower (tetraploid) 2	0.065
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	1.800
	CRR073298	Stem 2	1.899
	CRR073299	Stem 3	0.712
	CRR073300	Leaf 1	1.344
	CRR073301	Leaf 2	2.177
	CRR073302	Leaf 3	0.359
	CRR073303	Juvenile bud 1	0.086
	CRR073304	Juvenile bud 2	0.023
	CRR073305	Juvenile bud 3	0.185
	CRR073306	Third green 1	0.165
	CRR073307	Third green 2	0.225
	CRR073308	Third green 3	0.119
	CRR073309	Second white 1	0.002
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.083
	CRR073313	Silver flowering 2	0.266
	CRR073314	Silver flowering 3	0.143
	CRR073315	Gold flowering 1	0.860
	CRR073316	Gold flowering 2	2.315
	CRR073317	Gold flowering 3	1.942
	CRR073318	Tawny withering 1	0.612
	CRR073319	Tawny withering 2	3.962
	CRR073320	Tawny withering 3	1.040