Gene detail

Detail information of GWHGAAZE033055

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011092588.1	4.3238E-105	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 isoform X2 [Sesamum indicum]
COG	YP_001958461.1	0.0000003	hypothetical protein Aasi_1443
Swissprot	tr\|Q9FSG7\|TP1A_MALDO	6E-68	Thaumatin-like protein 1a (Precursor)
trEMBL	tr\|A0A022REJ0\|A0A022REJ0_ERYGU	8E-95	Uncharacterized protein {ECO:0000313\|EMBL:EYU38797.1}
TAIR10	AT5G38280.1	2E-77	PR5-like receptor kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000094	gene	32101	35086	-
GWHAAZE00000094	mRNA	32101	35086	-
GWHAAZE00000094	exon	32101	32510	-
GWHAAZE00000094	exon	32874	33359	-
GWHAAZE00000094	exon	33976	34683	-
GWHAAZE00000094	exon	35008	35086	-
GWHAAZE00000094	CDS	35008	35086	-
GWHAAZE00000094	CDS	33976	34683	-
GWHAAZE00000094	CDS	32874	33359	-
GWHAAZE00000094	CDS	32101	32510	-

Transcript Sequence
>GWHTAAZE033094 ATGATCGACTTGATATTCAAAGTATACGTTGACTCTGCCCTTTCAGAGCTCCTTCTTCCTTTACCCCCACATTTCCGGTGGGTACACTCATGGGCAGCAATTACACTAGTTAACAAATGTAATTACACAGTATGGCCAGGCGTCGTGACCTTAGATGGGAGTCCAGAGCTCCCCACCACCGGTTTTGTGCTCCCAAAAAACGAATCCAGGACCATTAACGCGCCAACGTTCTGGGTAGGCAAAATCTGGGGTCGCACCCACTGCTCCGTTAACACTACCAGAAACTTCTCCAGGTTCTCCTGTCTCACTGGTGATTGCGGCTCCGGGAAAATTGAATGCGCTGGCTTATTCGGTGTTAAACCTGTTACACAGGCTATGTTCTATCTTAACCAATTTAATGATACCAATCTTTACGACCTCAGCATTGACGATGGGTACAACCTTCCTATGCTGATTGTACCTCAGGGTGGGACCGGGGTCAATTGTAGTAACACGGGATGTATTTCAGACTTGAACCAGGCTTGTCCGTCAAAGTTGAAGGTGACGAGTACGGGAGGAGAGGGGGTGGCGTGCAAGAGCGCGTGCGACGCGTTTGGGACTGAACAGTACTGTTGCAATGGCACGGACACTACACCCAAAACGTGCAAGCCAACTTCCTACTCGGAGTATTTCAAGAAGGCATGCCCACACGCTTACAGATACTTCTTTGATAACGAGACCAGCACCATTAGTTGTGCTGGTGCGGATTACCTAATCACCTTCTGCCCATCCGCAACAGACGAATCTGTATATCCTACACCACCGGCACTAAGGAAACGAAAGACTAGATGGTTATTGAAGTTTGGGGTAGTTCTCGGTGGAGGAATAGCGGCACTCTCAATTTTGAGTTACGTGGTTTTCTGGCGATGGCGGAAAGCTGGTTTAACCGACACCAAATTGGACCTAAGTGGGCCCACAAAGTTAAGCGCTTCATTCCTACCATCAGATATTCGGTGCTTTTCACTTGCTGAAATAAAATCTGGTACTAACAACTTCGACGACAATCTTGTGATCGGCGTTGGAGGATTTGGCAACGTGTATAAAGGCTATATAGACAACGGTGCAACCACTGTTGCAATCAAACGATTAAACGCTCTCTCTAATCAGGGTATTCATGAGTTCAAAACAGAGATCAAAATGCTATCCAAATTACGGCATCTTCATCTTGTGTCCTTAATTGGATGTTGTGAGGATAATGGGGAAATGGTATTGGTGTATGATTATATGGCTAATGCAATTATTCATGATATATCGGAGGAGCCGGTGAATTTGGCCGAGTGGGCTCGGTGTTGTTATAACACGGGGGCCCTTGATGAAATTATTGATCTTCATGTATGGGACGAGATTGCACCAGAGTGTTTAAAGAAGTTTGTCGATGTAGCTTATATCTGCATCCAAGAACTAGGGATCAATCGTCCGTCGATGAATGACGTGGTTTGGAATCTAGAGCTTGCGTTGCAACTTCAAGAGGCTGCTGAAAATATGAGTGCTAATGGAGACGCGCTTGAAACCTTGGAAATTTTCACGAGTCCGCCTTTCCATCTTGGAGAGGATGCCTCGATAGAGCATGATGAGAGCTTGTCTAGGTCGATTCAATTAGCAGGTAGCTCTAGAAGTAGTGTCTTGTTACTGAGTAACAACTGA

Network for GWHGAAZE033055

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00314.18	Thaumatin	38	256	1.90E-70
PF07714.18	PK_Tyr_Ser-Thr	350	428	1.40E-13

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.694
	SRR3591706	second leaf	8.545
	SRR3591707	mature leaf	6.882
	SRR3591708	Shoot apex	8.446
	SRR3591709	Stem	2.940
	SRR3591710	White floral bud	0.981
	SRR3591711	White flower	1.957
	SRR3591712	Green floral bud	0.649
	SRR3591713	Yellow flower	0.083
SRP173429	SRR8316895	Juvenile bud stage	3.513
	SRR8316896	Juvenile bud stage	1.830
	SRR8316897	Juvenile bud stage	1.468
	SRR8316894	Third green stage	0.556
	SRR8316900	Third green stage	0.949
	SRR8316901	Third green stage	0.951
	SRR8316898	Complete white stage	0.011
	SRR8316899	Complete white stage	1.751
	SRR8316903	Complete white stage	0.774
	SRR8316902	Silver flowering stage	0.068
	SRR8316904	Silver flowering stage	0.140
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.260
	SRR8316907	Gold flowering stage	0.081
	SRR8316908	Gold flowering stage	0.245
SRP132670	SRR6706286	Control	1.402
	SRR6706287	Light intensity 50%	1.488
	SRR6706288	Light intensity 20%	0.654
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.489
	CNS0095593	Slightly white alabastrum(diploid) 2	2.449
	CNS0095594	Slightly white alabastrum(diploid) 3	1.654
	CNS0095595	Whole white alabastrum(diploid) 2	1.596
	CNS0095596	Whole white alabastrum(diploid) 3	0.666
	CNS0095597	Whole white alabastrum(diploid) 4	1.214
	CNS0095598	Silvery flower (diploied) 1	4.835
	CNS0095599	Silvery flower (diploied) 2	2.190
	CNS0095600	Silvery flower (diploied) 3	0.848
	CNS0095601	Golden flower (diploid) 1	3.081
	CNS0095602	Golden flower (diploid) 2	1.830
	CNS0095603	Golden flower (diploid) 3	1.851
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.921
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.203
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.766
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.205
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.409
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.405
	CNS0095610	Silvery flower (tetraploid) 1	0.153
	CNS0095611	Silvery flower (tetraploid) 2	0.389
	CNS0095612	Silvery flower (tetraploid) 3	0.165
	CNS0095613	Golden flower (tetraploid) 1	0.143
	CNS0095614	Golden flower (tetraploid) 2	0.210
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	3.115
	CRR073298	Stem 2	2.128
	CRR073299	Stem 3	2.176
	CRR073300	Leaf 1	0.879
	CRR073301	Leaf 2	2.726
	CRR073302	Leaf 3	0.551
	CRR073303	Juvenile bud 1	0.066
	CRR073304	Juvenile bud 2	0.770
	CRR073305	Juvenile bud 3	0.300
	CRR073306	Third green 1	0.269
	CRR073307	Third green 2	0.266
	CRR073308	Third green 3	0.104
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.124
	CRR073313	Silver flowering 2	0.075
	CRR073314	Silver flowering 3	0.342
	CRR073315	Gold flowering 1	1.914
	CRR073316	Gold flowering 2	5.599
	CRR073317	Gold flowering 3	5.118
	CRR073318	Tawny withering 1	2.791
	CRR073319	Tawny withering 2	5.341
	CRR073320	Tawny withering 3	2.307