Gene detail

Detail information of GWHGAAZE032982

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KHN07113.1	2.7674E-45	Receptor-like protein kinase FERONIA [Glycine soja]
Swissprot	tr\|Q9FID9\|Y5389_ARATH	2E-39	Probable receptor-like protein kinase At5g38990 (Precursor)
trEMBL	tr\|M0RSN4\|M0RSN4_MUSAM	2E-60	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P16040_001}
TAIR10	AT5G38990.1	4E-36	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000081	gene	22785	25569	+
GWHAAZE00000081	mRNA	22785	25569	+
GWHAAZE00000081	exon	22785	22823	+
GWHAAZE00000081	exon	22927	22980	+
GWHAAZE00000081	exon	24301	24796	+
GWHAAZE00000081	exon	25142	25569	+
GWHAAZE00000081	CDS	22785	22823	+
GWHAAZE00000081	CDS	22927	22980	+
GWHAAZE00000081	CDS	24301	24796	+
GWHAAZE00000081	CDS	25142	25569	+

Transcript Sequence
>GWHTAAZE033021 ATGGCGACGGTTTTGTCGACGGCAATGGTTGCCGGAAAGATGTGCATGGTTGAAACGCGTGGCCGTGTGGCCCGGTTGTTATATTGTATGAATGGCTCCCCGCAAAATTTAATCTTGATTTCTTCATTTTTCCTTGCTGGCCGCAATCCTAAAGTATATCTTCCACGAAAGACTAGACGATCATTGAAGCTTGGGTTAATTCTCGGTGGAGGAATAGCGGCACTCTCAATTTTGAGTTACGTGGTTTTCCGCCGATGGCAAAAAGCTGGTTTAACCCACACCAAGTCATTCCTACCATCACATATTCGGCGCTTTTCACTTGCTGAAATTAAATCTGGTACTAACAACTTCGACAACAACCTTGTGATTGGCGTTGGAGGATTTGGCAATGTGTATAAAGGCTGTATAGACAATGGTGCAACTACCGTTGCGATCAAGCGTTTGAACGTTTCATCTCATCAAGGAATTCGTGAGTTTGAAACAGAGATTGAAATGCTATCCAAACTACGACATCTTCATCTTGTGTCCCTAATTGGATGCTGCGAGGATAATGGGGAAATGGTATTGGTCTATGATTATATGGCTAATGTGTTATCCGGTAAGCCAGCAATTATTGAAGACATACCAGAAGAGCCAGTGAATTTGGCCGAATGGGCTCGGCGCTGTTATAAAACGGGGACCATTGATGAAATTATTGATCTTCATGTACGAGAAGAGATTGCATCGAAGTGTTTAAAGAAGTTTGTCGATGTAGCTTATAGTTGCATCCAAGAACAAGGGATCAATCGACCGTCGATGAGTGACGTGGTTTTGAGTCTGGAGCTTGCGTTGCAACTTCAAGAGGCTGCTGAGAATATGAGTGCTAATGGAGATGCGCTTGAGACCATGGAAAACTTTACTAATCTGCCTTTCCATCTTAGAGAGGATGCCTCGACGGAGCATAATGAGAGCTTGCTTAGGTTGATTGAATTAGATAGCAACTCTATAAGTAGTGTCTCATTATTGAGTAACAATTGA

Network for GWHGAAZE032982

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	122	196	3.10E-13

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.288
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.132
	SRR3591708	Shoot apex	0.071
	SRR3591709	Stem	1.011
	SRR3591710	White floral bud	0.065
	SRR3591711	White flower	0.059
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.025
SRP173429	SRR8316895	Juvenile bud stage	0.223
	SRR8316896	Juvenile bud stage	0.344
	SRR8316897	Juvenile bud stage	0.194
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.078
	SRR8316898	Complete white stage	0.085
	SRR8316899	Complete white stage	0.299
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.300
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.005
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.054
SRP132670	SRR6706286	Control	0.168
	SRR6706287	Light intensity 50%	0.131
	SRR6706288	Light intensity 20%	0.111
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.407
	CNS0095593	Slightly white alabastrum(diploid) 2	0.508
	CNS0095594	Slightly white alabastrum(diploid) 3	0.569
	CNS0095595	Whole white alabastrum(diploid) 2	0.278
	CNS0095596	Whole white alabastrum(diploid) 3	0.367
	CNS0095597	Whole white alabastrum(diploid) 4	0.085
	CNS0095598	Silvery flower (diploied) 1	0.523
	CNS0095599	Silvery flower (diploied) 2	0.145
	CNS0095600	Silvery flower (diploied) 3	0.054
	CNS0095601	Golden flower (diploid) 1	0.583
	CNS0095602	Golden flower (diploid) 2	0.443
	CNS0095603	Golden flower (diploid) 3	0.430
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.106
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.124
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.366
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.074
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.103
	CNS0095610	Silvery flower (tetraploid) 1	0.349
	CNS0095611	Silvery flower (tetraploid) 2	0.082
	CNS0095612	Silvery flower (tetraploid) 3	0.153
	CNS0095613	Golden flower (tetraploid) 1	0.232
	CNS0095614	Golden flower (tetraploid) 2	0.469
	CNS0095615	Golden flower (tetraploid) 3	0.068
CRA001975	CRR073297	Stem 1	0.211
	CRR073298	Stem 2	0.144
	CRR073299	Stem 3	0.059
	CRR073300	Leaf 1	0.201
	CRR073301	Leaf 2	0.014
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.573
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.002
	CRR073310	Second white 2	0.077
	CRR073311	Second white 3	0.365
	CRR073312	Silver flowering 1	0.128
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.020
	CRR073317	Gold flowering 3	0.317
	CRR073318	Tawny withering 1	2.575
	CRR073319	Tawny withering 2	3.295
	CRR073320	Tawny withering 3	2.426