Gene detail

Detail information of GWHGAAZE032820

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010034409.1	4.41251E-53	PREDICTED: receptor-like protein kinase FERONIA [Eucalyptus grandis]
COG	YP_003894027.1	3E-14	serine/threonine protein kinase
Swissprot	tr\|Q9SR05\|ANX1_ARATH	2E-52	Receptor-like protein kinase ANXUR1 (Precursor)
trEMBL	tr\|A0A059ADR7\|A0A059ADR7_EUCGR	2E-53	Uncharacterized protein {ECO:0000313\|EMBL:KCW51943.1}
TAIR10	AT3G04690.1	2E-46	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000050	gene	73265	74022	+
GWHAAZE00000050	mRNA	73265	74022	+
GWHAAZE00000050	exon	73265	73452	+
GWHAAZE00000050	exon	73524	74022	+
GWHAAZE00000050	CDS	73265	73452	+
GWHAAZE00000050	CDS	73524	74022	+

Transcript Sequence
>GWHTAAZE032859 ATGTCGTGGGTAAAACGTGTTAAGATTTGTATAGGGGCAGCTCGAGGATTAGATTATCTTCACACTGGTACAGGTATATTGCATAGGGTTATACACCGTGACGTGAAGACTTCAAATATCTTATTGGATGAAAATTGGGCAGCTAAGATATCTGACTTTGGGTTGTCCAAAACAGGCCCGGCAAATCACCGTTTAACTAGAAAATCAGATGTTTATTCTTTTGGAGTAGTGTTGCTCGAATTGTTGTGTGGAAGGCCGGCATTTGATTATAAACTGCCTAAGGAGCAAATAAGCCTAGTGCTATGGGCCCAAGACTGCATCCAAGAAGAAAAAGCACACTTGCTTATAGATCCCAATTTGAAGTGGGAAATTTTTGAGAATTCTTTGAATGCTTTTGTGAAAATTGCTGGTCAGTGCTTGCTTAGTCGTTCGAAAAAACGACCTACAATGAGTGAGGTTGTGGCCTCACTTGAGGTTGCATTAGCATTACAGGAGAAGAAGGATTCTTCTTTCCTTGATGAAGATATTTTTGATTTTGGTGAGACTTATGATGACCGAGAGGTGGTGGGCTCTTCTAGCTTGCACTCGGATAATGTATATACAGATTCTTCAACTACTCTCGTGCCATTATCCCACTATCCACCCGCAGGGCCTTGTGAAGTAATTGGAAAACCCGCTTTGAGGTAA

Network for GWHGAAZE032820

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	9	58	2.90E-11
PF00069.26	Pkinase	63	155	4.80E-08

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_LRR-III

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	3.571
	SRR8316896	Juvenile bud stage	2.866
	SRR8316897	Juvenile bud stage	2.916
	SRR8316894	Third green stage	1.786
	SRR8316900	Third green stage	2.812
	SRR8316901	Third green stage	3.060
	SRR8316898	Complete white stage	0.642
	SRR8316899	Complete white stage	2.941
	SRR8316903	Complete white stage	1.924
	SRR8316902	Silver flowering stage	2.094
	SRR8316904	Silver flowering stage	4.214
	SRR8316905	Silver flowering stage	1.714
	SRR8316906	Gold flowering stage	5.890
	SRR8316907	Gold flowering stage	5.297
	SRR8316908	Gold flowering stage	5.987
SRP132670	SRR6706286	Control	1.613
	SRR6706287	Light intensity 50%	2.210
	SRR6706288	Light intensity 20%	1.928
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.123
	CNS0095593	Slightly white alabastrum(diploid) 2	1.430
	CNS0095594	Slightly white alabastrum(diploid) 3	1.431
	CNS0095595	Whole white alabastrum(diploid) 2	1.261
	CNS0095596	Whole white alabastrum(diploid) 3	0.928
	CNS0095597	Whole white alabastrum(diploid) 4	1.295
	CNS0095598	Silvery flower (diploied) 1	3.309
	CNS0095599	Silvery flower (diploied) 2	3.267
	CNS0095600	Silvery flower (diploied) 3	1.898
	CNS0095601	Golden flower (diploid) 1	3.755
	CNS0095602	Golden flower (diploid) 2	4.186
	CNS0095603	Golden flower (diploid) 3	2.903
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.559
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.538
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.871
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.185
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.992
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.050
	CNS0095610	Silvery flower (tetraploid) 1	2.282
	CNS0095611	Silvery flower (tetraploid) 2	0.915
	CNS0095612	Silvery flower (tetraploid) 3	1.614
	CNS0095613	Golden flower (tetraploid) 1	0.932
	CNS0095614	Golden flower (tetraploid) 2	2.481
	CNS0095615	Golden flower (tetraploid) 3	2.007
CRA001975	CRR073297	Stem 1	2.184
	CRR073298	Stem 2	2.980
	CRR073299	Stem 3	0.572
	CRR073300	Leaf 1	1.621
	CRR073301	Leaf 2	0.919
	CRR073302	Leaf 3	0.428
	CRR073303	Juvenile bud 1	0.363
	CRR073304	Juvenile bud 2	0.043
	CRR073305	Juvenile bud 3	0.301
	CRR073306	Third green 1	0.257
	CRR073307	Third green 2	0.062
	CRR073308	Third green 3	0.114
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.029
	CRR073311	Second white 3	0.040
	CRR073312	Silver flowering 1	0.109
	CRR073313	Silver flowering 2	0.889
	CRR073314	Silver flowering 3	0.081
	CRR073315	Gold flowering 1	0.028
	CRR073316	Gold flowering 2	2.565
	CRR073317	Gold flowering 3	0.020
	CRR073318	Tawny withering 1	1.701
	CRR073319	Tawny withering 2	0.750
	CRR073320	Tawny withering 3	1.776