Gene detail

Detail information of GWHGAAZE032815

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44215.1	3.94072E-73	hypothetical protein MIMGU_mgv1a000477mg [Erythranthe guttata]
COG	YP_284821.1	2E-16	protein kinase:GAF
Swissprot	tr\|Q9SR05\|ANX1_ARATH	4E-66	Receptor-like protein kinase ANXUR1 (Precursor)
trEMBL	tr\|A0A022RZ14\|A0A022RZ14_ERYGU	1E-73	Uncharacterized protein {ECO:0000313\|EMBL:EYU44215.1}
TAIR10	AT3G04690.1	3E-58	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000050	gene	50662	51420	+
GWHAAZE00000050	mRNA	50662	51420	+
GWHAAZE00000050	exon	50662	51420	+
GWHAAZE00000050	CDS	50662	51420	+

Transcript Sequence
>GWHTAAZE032854 ATGTCGTGGGTAAAACGTGTTAAGATTTGTATAGGGGCAGCTCGAGGATTAGATTATCTTCACACTGGTACAGGTATATTGCATAGGGTTATACACCGTGACGTGAAGACTTCAAATATCTTATTGGATGAAAATTGGGCAGCTAAGATATCTGACTTTGGGTTGTCCAAAACAGGCCCGGCAAATCAGTCATTGACCCATGTTAGTACCCGTGTTAAAGGAACTCCAGGTTATTGCGATCCAGAGTATTTCTTGACTCGCCGTTTAACTAGAAAATCAGATGTTTATTCTTTTGGAGTAGTGTTGCTCGAAGTGTTGTGTGGAAGGCCGGCATTTGATTATAAACTGCCTAAGGAGCAAATAAGCCTAGTGCTATGGGCCCAAGACTGCATCCAAGAAGAAAAAGCACACTTGCTTATAGATCCCAATTTGAAGTGGGAAATTTTTGAGAATTCTTTGAACGCTTTTGTGAATATTGCTGGTCAGTGCTTGCATAGTCGTTCGAAAAAACGACCTACAATGAGTGAGGTTGTAGCCTCACTTGAGGTTGCATTGGCATTACAGGAGAAGAAGGATTCTTCTTTCCTTGATGAAGATATTTTTGATTTTGGTGAGACTTATGACGACCGAGAGGTGGTGGGCTCTTCTAGCTTGCACTCGGATAATGTATATACAGATTCTTCAACTACTCTCGTGCCATTATCCCACTATCCACCCGCAGGGCCTTGTGAAGTAATTGGAAAACCCGCTTTGAGGTAA

Network for GWHGAAZE032815

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0130	map03460 Fanconi anemia pathway Protein Kinases RLK-Pelle_CrRLK1L-1 family Protein Kinases RLK-Pelle_CrRLK1L-1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	9	179	1.60E-29

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	6.092
	SRR8316896	Juvenile bud stage	8.055
	SRR8316897	Juvenile bud stage	0.972
	SRR8316894	Third green stage	2.488
	SRR8316900	Third green stage	3.515
	SRR8316901	Third green stage	3.694
	SRR8316898	Complete white stage	2.018
	SRR8316899	Complete white stage	5.632
	SRR8316903	Complete white stage	4.943
	SRR8316902	Silver flowering stage	5.277
	SRR8316904	Silver flowering stage	8.676
	SRR8316905	Silver flowering stage	5.216
	SRR8316906	Gold flowering stage	16.628
	SRR8316907	Gold flowering stage	11.601
	SRR8316908	Gold flowering stage	6.624
SRP132670	SRR6706286	Control	2.702
	SRR6706287	Light intensity 50%	3.469
	SRR6706288	Light intensity 20%	2.800
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.849
	CNS0095593	Slightly white alabastrum(diploid) 2	1.175
	CNS0095594	Slightly white alabastrum(diploid) 3	3.055
	CNS0095595	Whole white alabastrum(diploid) 2	2.383
	CNS0095596	Whole white alabastrum(diploid) 3	0.834
	CNS0095597	Whole white alabastrum(diploid) 4	2.170
	CNS0095598	Silvery flower (diploied) 1	10.123
	CNS0095599	Silvery flower (diploied) 2	4.700
	CNS0095600	Silvery flower (diploied) 3	2.104
	CNS0095601	Golden flower (diploid) 1	6.939
	CNS0095602	Golden flower (diploid) 2	6.557
	CNS0095603	Golden flower (diploid) 3	6.208
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.499
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.400
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.569
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.665
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.278
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.315
	CNS0095610	Silvery flower (tetraploid) 1	0.843
	CNS0095611	Silvery flower (tetraploid) 2	0.930
	CNS0095612	Silvery flower (tetraploid) 3	1.302
	CNS0095613	Golden flower (tetraploid) 1	0.393
	CNS0095614	Golden flower (tetraploid) 2	0.797
	CNS0095615	Golden flower (tetraploid) 3	0.862
CRA001975	CRR073297	Stem 1	3.685
	CRR073298	Stem 2	3.438
	CRR073299	Stem 3	0.798
	CRR073300	Leaf 1	1.862
	CRR073301	Leaf 2	3.302
	CRR073302	Leaf 3	0.657
	CRR073303	Juvenile bud 1	0.941
	CRR073304	Juvenile bud 2	0.239
	CRR073305	Juvenile bud 3	0.184
	CRR073306	Third green 1	0.347
	CRR073307	Third green 2	0.422
	CRR073308	Third green 3	0.182
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.054
	CRR073311	Second white 3	0.143
	CRR073312	Silver flowering 1	0.035
	CRR073313	Silver flowering 2	0.131
	CRR073314	Silver flowering 3	0.133
	CRR073315	Gold flowering 1	0.846
	CRR073316	Gold flowering 2	2.087
	CRR073317	Gold flowering 3	1.040
	CRR073318	Tawny withering 1	1.074
	CRR073319	Tawny withering 2	0.838
	CRR073320	Tawny withering 3	0.969