Detail information of GWHGAAZE032764


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002266518.27.70544E-87PREDICTED: dof zinc finger protein DOF5.7 [Vitis vinifera]
Swissprottr|Q9LSL6|DOF57_ARATH2E-56Dof zinc finger protein DOF5.7
trEMBLtr|F6I721|F6I721_VITVI2E-86Putative uncharacterized protein {ECO:0000313|EMBL:CCB62739.1}
TAIR10AT5G65590.13E-35Dof-type zinc finger DNA-binding family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000040gene962092963003-
GWHAAZE00000040mRNA962092963003-
GWHAAZE00000040exon962092963003-
GWHAAZE00000040CDS962092963003-
Transcript Sequence

Network for GWHGAAZE032764

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.16zf-Dof35901.90E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.119
SRR3591706second leaf2.703
SRR3591707mature leaf2.081
SRR3591708Shoot apex2.197
SRR3591709Stem3.125
SRR3591710White floral bud1.833
SRR3591711White flower3.034
SRR3591712Green floral bud1.148
SRR3591713Yellow flower3.212
SRP173429 SRR8316895Juvenile bud stage 0.953
SRR8316896Juvenile bud stage 1.628
SRR8316897Juvenile bud stage 0.333
SRR8316894Third green stage 0.788
SRR8316900Third green stage 2.473
SRR8316901Third green stage 2.100
SRR8316898Complete white stage 0.051
SRR8316899Complete white stage 0.654
SRR8316903Complete white stage 0.878
SRR8316902Silver flowering stage0.147
SRR8316904Silver flowering stage0.289
SRR8316905Silver flowering stage0.175
SRR8316906Gold flowering stage 0.030
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.129
SRP132670SRR6706286Control0.626
SRR6706287Light intensity 50%1.442
SRR6706288Light intensity 20%1.271
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.847
CNS0095593Slightly white alabastrum(diploid) 21.796
CNS0095594Slightly white alabastrum(diploid) 30.397
CNS0095595Whole white alabastrum(diploid) 20.774
CNS0095596Whole white alabastrum(diploid) 31.099
CNS0095597Whole white alabastrum(diploid) 41.282
CNS0095598Silvery flower (diploied) 11.193
CNS0095599Silvery flower (diploied) 21.310
CNS0095600Silvery flower (diploied) 30.135
CNS0095601Golden flower (diploid) 11.180
CNS0095602Golden flower (diploid) 21.526
CNS0095603Golden flower (diploid) 31.727
CNS0095604Slightly white alabastrum(tetraploid) 11.868
CNS0095605Slightly white alabastrum(tetraploid) 20.974
CNS0095606Slightly white alabastrum(tetraploid) 31.858
CNS0095607Whole white alabastrum(tetraploid) 11.122
CNS0095608Whole white alabastrum(tetraploid) 20.448
CNS0095609Whole white alabastrum(tetraploid) 31.197
CNS0095610Silvery flower (tetraploid) 10.216
CNS0095611Silvery flower (tetraploid) 20.196
CNS0095612Silvery flower (tetraploid) 30.390
CNS0095613Golden flower (tetraploid) 10.439
CNS0095614Golden flower (tetraploid) 21.410
CNS0095615Golden flower (tetraploid) 30.108
CRA001975CRR073297Stem 12.808
CRR073298Stem 22.627
CRR073299Stem 32.727
CRR073300Leaf 13.530
CRR073301Leaf 22.176
CRR073302Leaf 32.830
CRR073303Juvenile bud 12.072
CRR073304Juvenile bud 21.211
CRR073305Juvenile bud 31.277
CRR073306Third green 10.415
CRR073307Third green 20.247
CRR073308Third green 30.710
CRR073309Second white 10.001
CRR073310Second white 20.171
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.049
CRR073315Gold flowering 11.400
CRR073316Gold flowering 23.151
CRR073317Gold flowering 32.259
CRR073318Tawny withering 13.498
CRR073319Tawny withering 20.499
CRR073320Tawny withering 32.260