Detail information of GWHGAAZE032755


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010277557.10PREDICTED: dynamin-related protein 3A-like [Nelumbo nucifera]
Swissprottr|Q8S944|DRP3A_ARATH0Dynamin-related protein 3A
trEMBLtr|A0A059AT85|A0A059AT85_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW56934.1}
TAIR10AT4G33650.10dynamin-related protein 3A

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000040gene598164611596-
GWHAAZE00000040mRNA598164611596-
GWHAAZE00000040exon611270611596-
GWHAAZE00000040exon608294608576-
GWHAAZE00000040exon608127608155-
GWHAAZE00000040exon607912608013-
GWHAAZE00000040exon606772606840-
GWHAAZE00000040exon606613606672-
GWHAAZE00000040exon606422606535-
GWHAAZE00000040exon606294606342-
GWHAAZE00000040exon606012606121-
GWHAAZE00000040exon604936605028-
GWHAAZE00000040exon604458604550-
GWHAAZE00000040exon604224604361-
GWHAAZE00000040exon603321603434-
GWHAAZE00000040exon603137603235-
GWHAAZE00000040exon602956602998-
GWHAAZE00000040exon601907602052-
GWHAAZE00000040exon601661601807-
GWHAAZE00000040exon600473600525-
GWHAAZE00000040exon599815599914-
GWHAAZE00000040exon598164598202-
GWHAAZE00000040CDS611270611596-
GWHAAZE00000040CDS608294608576-
GWHAAZE00000040CDS608127608155-
GWHAAZE00000040CDS607912608013-
GWHAAZE00000040CDS606772606840-
GWHAAZE00000040CDS606613606672-
GWHAAZE00000040CDS606422606535-
GWHAAZE00000040CDS606294606342-
GWHAAZE00000040CDS606012606121-
GWHAAZE00000040CDS604936605028-
GWHAAZE00000040CDS604458604550-
GWHAAZE00000040CDS604224604361-
GWHAAZE00000040CDS603321603434-
GWHAAZE00000040CDS603137603235-
GWHAAZE00000040CDS602956602998-
GWHAAZE00000040CDS601907602052-
GWHAAZE00000040CDS601661601807-
GWHAAZE00000040CDS600473600525-
GWHAAZE00000040CDS599815599914-
GWHAAZE00000040CDS598164598202-
Transcript Sequence

Network for GWHGAAZE032755

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00350.24Dynamin_N372133.60E-51
PF01031.21Dynamin_M2245075.30E-101
PF02212.19GED6387271.50E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17065DNM1L TNF signaling pathway map04668
Mitophagy - yeastmap04139
Apoptosis - flymap04214
Necroptosismap04217
NOD-like receptor signaling pathwaymap04621

Gene Ontology

GO term OntologyName
GO:0003924molecular_functionGTPase activity
GO:0005525molecular_functionGTP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.541
SRR3591706second leaf6.331
SRR3591707mature leaf7.300
SRR3591708Shoot apex6.556
SRR3591709Stem4.794
SRR3591710White floral bud10.449
SRR3591711White flower18.953
SRR3591712Green floral bud9.133
SRR3591713Yellow flower13.775
SRP173429 SRR8316895Juvenile bud stage 6.214
SRR8316896Juvenile bud stage 8.938
SRR8316897Juvenile bud stage 4.609
SRR8316894Third green stage 4.417
SRR8316900Third green stage 8.258
SRR8316901Third green stage 8.281
SRR8316898Complete white stage 4.050
SRR8316899Complete white stage 9.291
SRR8316903Complete white stage 5.873
SRR8316902Silver flowering stage6.370
SRR8316904Silver flowering stage9.969
SRR8316905Silver flowering stage3.959
SRR8316906Gold flowering stage 18.585
SRR8316907Gold flowering stage 19.086
SRR8316908Gold flowering stage 24.972
SRP132670SRR6706286Control5.068
SRR6706287Light intensity 50%5.886
SRR6706288Light intensity 20%6.020
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.136
CNS0095593Slightly white alabastrum(diploid) 25.315
CNS0095594Slightly white alabastrum(diploid) 35.113
CNS0095595Whole white alabastrum(diploid) 24.506
CNS0095596Whole white alabastrum(diploid) 34.883
CNS0095597Whole white alabastrum(diploid) 45.979
CNS0095598Silvery flower (diploied) 15.051
CNS0095599Silvery flower (diploied) 24.757
CNS0095600Silvery flower (diploied) 37.377
CNS0095601Golden flower (diploid) 15.283
CNS0095602Golden flower (diploid) 26.822
CNS0095603Golden flower (diploid) 37.099
CNS0095604Slightly white alabastrum(tetraploid) 16.277
CNS0095605Slightly white alabastrum(tetraploid) 25.400
CNS0095606Slightly white alabastrum(tetraploid) 36.233
CNS0095607Whole white alabastrum(tetraploid) 16.836
CNS0095608Whole white alabastrum(tetraploid) 28.316
CNS0095609Whole white alabastrum(tetraploid) 39.736
CNS0095610Silvery flower (tetraploid) 114.067
CNS0095611Silvery flower (tetraploid) 29.217
CNS0095612Silvery flower (tetraploid) 39.282
CNS0095613Golden flower (tetraploid) 18.397
CNS0095614Golden flower (tetraploid) 29.929
CNS0095615Golden flower (tetraploid) 317.595
CRA001975CRR073297Stem 16.827
CRR073298Stem 26.513
CRR073299Stem 34.220
CRR073300Leaf 15.535
CRR073301Leaf 24.915
CRR073302Leaf 33.745
CRR073303Juvenile bud 13.583
CRR073304Juvenile bud 22.874
CRR073305Juvenile bud 33.587
CRR073306Third green 11.967
CRR073307Third green 21.435
CRR073308Third green 31.653
CRR073309Second white 13.301
CRR073310Second white 24.628
CRR073311Second white 35.179
CRR073312Silver flowering 12.944
CRR073313Silver flowering 22.262
CRR073314Silver flowering 32.943
CRR073315Gold flowering 11.445
CRR073316Gold flowering 24.385
CRR073317Gold flowering 32.098
CRR073318Tawny withering 11.779
CRR073319Tawny withering 22.233
CRR073320Tawny withering 32.461