Gene detail

Detail information of GWHGAAZE032721

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU35515.1	4.739E-141	hypothetical protein MIMGU_mgv1a003330mg [Erythranthe guttata]
COG	YP_007311106.1	6E-28	beta-fructosidase, levanase/invertase
Swissprot	tr\|Q39692\|INV2_DAUCA	2E-142	Beta-fructofuranosidase, insoluble isoenzyme 2 (Precursor)
trEMBL	tr\|A0A022R9E5\|A0A022R9E5_ERYGU	2E-141	Uncharacterized protein {ECO:0000313\|EMBL:EYU35515.1}
TAIR10	AT2G36190.1	4E-90	cell wall invertase 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000038	gene	72669	84503	+
GWHAAZE00000038	mRNA	72669	84503	+
GWHAAZE00000038	exon	72669	73089	+
GWHAAZE00000038	exon	73260	73528	+
GWHAAZE00000038	exon	74238	74396	+
GWHAAZE00000038	exon	82885	82971	+
GWHAAZE00000038	exon	84324	84503	+
GWHAAZE00000038	CDS	72669	73089	+
GWHAAZE00000038	CDS	73260	73528	+
GWHAAZE00000038	CDS	74238	74396	+
GWHAAZE00000038	CDS	82885	82971	+
GWHAAZE00000038	CDS	84324	84503	+

Transcript Sequence
>GWHTAAZE032759 ATGTATTATAAGGGAATTTACCACTTATTCTACCAATACAATCCTAAAAGTGTTGAGGACGCAAATATTGAGTGGGCTCATTCCGTGTCAACAGACATGGTCAATTGGAAACAATTAAATCCAGCAATTTACCCTTCAAAGCGTTTTGATAAATTCGGATGTTGGTCCGGATCGGCTACTATCCGCCCGGGTGGAAAACCCATCATCCTCTACACTGGAGTTGTTGACCCATTACCATATCCGGGCATTCAAGTACAAAACTATGCGGTCCCCGCCAACTATTCGGATCCCTACCTCCAAAAATGGGTCAAACCCGATAATAACCCAATAGTCACTGCCACGAAAGGCGAGAACTCAACCGCATTTCGTGACCCGACAACCGCTTGGTTAATAAATGGGCATTGGAATATTCTAGTTGGCGGGGAAAATGTGAAGCATGTGTTGAAGGTGAGTCTTGATGCTACTAGGAATGATTACTACACAATTGGACAATATTTGCCTGATAAAGATCGATACGTGCCAAATGATGGGTCAATTTATGGTTGGGGCGGGTTAAGATATGATTATGGAAATTTTTATGCATCCAAGACATTCTTTGACGCGAGTAAGAAACGAAGGATTTTGTGGGGTTGGTCTAATGAATCCGATTCTCATAAAGAGGATGTTGTGAAAGGATGGGCAGGAGTTCAGACCATACCACGTTCCGTTTGGCTGGATCCGAATGGAAAACAATTGCTACAGTGGCCAATCCAAGAATTAGAAACTTTAAGGGGGCAAAACGTCAAATTCAGCAATAAAATACTGCATAAAGGAGATCGTATAGAAATTAAAGGAATAGCAGCCGCGCAGGCAGATGTTGATGTAACTTTCTCATTCCCAAGTTTGGACAAAGCTGAGCCATCAGATCCCAATTGGGTGGGTTTTGATGGGCAAGATATCGATCATTCTGTTATAGAAAGTTTTGGAGTTGGAGGAAAAATATGCATAACATCTAGGGTTTATCCAACTCTAGCTGTCAGTAACAATGCTCATCTATATGCCTTCAACAATGGGAGCGAGACCGTTACAATCGAGAGATTAGAAGCTTGGACCATGAACAATTCTCAAATGAACTAG

Network for GWHGAAZE032721

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00251.21	Glyco_hydro_32N	1	142	1.10E-42
PF08244.13	Glyco_hydro_32C	313	363	3.20E-12

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01193	INV, sacA	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Galactose metabolism	map00052
		Starch and sucrose metabolism	map00500

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0004553	molecular_function	hydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.109
	SRR3591707	mature leaf	0.309
	SRR3591708	Shoot apex	0.074
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	7.787
	SRR3591711	White flower	31.248
	SRR3591712	Green floral bud	0.560
	SRR3591713	Yellow flower	18.528
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.069
	SRR8316897	Juvenile bud stage	0.024
	SRR8316894	Third green stage	0.305
	SRR8316900	Third green stage	4.463
	SRR8316901	Third green stage	3.283
	SRR8316898	Complete white stage	8.911
	SRR8316899	Complete white stage	23.649
	SRR8316903	Complete white stage	17.988
	SRR8316902	Silver flowering stage	37.035
	SRR8316904	Silver flowering stage	46.348
	SRR8316905	Silver flowering stage	24.031
	SRR8316906	Gold flowering stage	77.477
	SRR8316907	Gold flowering stage	89.355
	SRR8316908	Gold flowering stage	97.236
SRP132670	SRR6706286	Control	4.310
	SRR6706287	Light intensity 50%	4.086
	SRR6706288	Light intensity 20%	4.395
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.041
	CNS0095593	Slightly white alabastrum(diploid) 2	0.213
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.429
	CNS0095596	Whole white alabastrum(diploid) 3	0.027
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	2.724
	CNS0095599	Silvery flower (diploied) 2	5.625
	CNS0095600	Silvery flower (diploied) 3	45.688
	CNS0095601	Golden flower (diploid) 1	4.554
	CNS0095602	Golden flower (diploid) 2	36.341
	CNS0095603	Golden flower (diploid) 3	28.858
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.677
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.043
	CNS0095606	Slightly white alabastrum(tetraploid) 3	9.509
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.173
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.118
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.047
	CNS0095610	Silvery flower (tetraploid) 1	81.450
	CNS0095611	Silvery flower (tetraploid) 2	33.368
	CNS0095612	Silvery flower (tetraploid) 3	31.145
	CNS0095613	Golden flower (tetraploid) 1	19.081
	CNS0095614	Golden flower (tetraploid) 2	36.569
	CNS0095615	Golden flower (tetraploid) 3	11.413
CRA001975	CRR073297	Stem 1	0.013
	CRR073298	Stem 2	0.098
	CRR073299	Stem 3	0.019
	CRR073300	Leaf 1	1.521
	CRR073301	Leaf 2	1.149
	CRR073302	Leaf 3	2.210
	CRR073303	Juvenile bud 1	0.358
	CRR073304	Juvenile bud 2	0.468
	CRR073305	Juvenile bud 3	2.411
	CRR073306	Third green 1	24.591
	CRR073307	Third green 2	36.552
	CRR073308	Third green 3	25.953
	CRR073309	Second white 1	26.594
	CRR073310	Second white 2	18.427
	CRR073311	Second white 3	19.901
	CRR073312	Silver flowering 1	9.164
	CRR073313	Silver flowering 2	10.273
	CRR073314	Silver flowering 3	17.264
	CRR073315	Gold flowering 1	0.062
	CRR073316	Gold flowering 2	0.064
	CRR073317	Gold flowering 3	0.046
	CRR073318	Tawny withering 1	0.489
	CRR073319	Tawny withering 2	1.735
	CRR073320	Tawny withering 3	0.316