Gene detail

Detail information of GWHGAAZE032695

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009757205.1	0	PREDICTED: dipeptidyl peptidase 9 [Nicotiana sylvestris]
COG	YP_003268648.1	0	peptidase S9B dipeptidylpeptidase IV domain-containing protein
Swissprot	tr\|Q10MJ1\|CGEP_ORYSJ	0.0000003	Probable glutamyl endopeptidase, chloroplastic (Precursor)
trEMBL	tr\|A0A061G2C6\|A0A061G2C6_THECC	0	Prolyl oligopeptidase family protein isoform 1 {ECO:0000313\|EMBL:EOY23543.1}
TAIR10	AT5G24260.1	0	prolyl oligopeptidase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000036	gene	2197257	2201581	-
GWHAAZE00000036	mRNA	2197257	2201581	-
GWHAAZE00000036	exon	2197257	2197808	-
GWHAAZE00000036	exon	2197889	2198998	-
GWHAAZE00000036	exon	2199137	2199166	-
GWHAAZE00000036	exon	2200038	2200229	-
GWHAAZE00000036	exon	2201141	2201581	-
GWHAAZE00000036	CDS	2201141	2201581	-
GWHAAZE00000036	CDS	2200038	2200229	-
GWHAAZE00000036	CDS	2199137	2199166	-
GWHAAZE00000036	CDS	2197889	2198998	-
GWHAAZE00000036	CDS	2197257	2197808	-

Transcript Sequence
>GWHTAAZE032733 ATGCAATCCACCGAGACAAATAAGAAGAAGAATCTGAAACGTCAACGATCTTTGCACAGTGAGATGCCTCTAACTGACATAACAGCTTCAAATACTCTTGATGACTGTATTCCTTTTCCTGTTGAAGAGATAGTGCAGTCCCCTTTGCCTGGCTACGGAGCTCCAACTTCAGTCAGCTTCAGTTCCGATGATAGTTTGGTTACTTACTTGTTTAGCCCTGATCACAGTTTGAACAGGAAGGTCTTTGTGTTTGATCTTGCTACTTATAAGCAAGAATTGTTTTTTGCCCCTCCGGGTGGTGGGCTTGATGAGGATAATTTATCAGCAGAAGAGAAGCTTAGGAGGGAGAGGTCAAGGGAGCGAGGGTTGGGGGTGACACGGTACGAATGGGTGAAAACAAGCTCAAAGAAGAAGACAATCATGGTCCCTTTGCCTGCTGGGATCTATTTCCAAGATGTTTCTTCACAACCAGAGCTTAAACTTCCAAGTGCATCTTCCTCTCCAATTATGGATCCACATCCTTCACCTTGTGGCACTATGCTTGCTTATGTGAAAGATTCAGAACTGCACGTACTAGATCTTCTTTCCAACGAGTCAAAGCAATTAACGTCTGGTGCAGACGGAAATACTATAACGCATGGTGTTGCCGAATACATAGCCCAGGAAGAGATGGAACGGAGGAATGGCTATTGGTGGTCATTGGACAGCAAATTCATAGCATTCACGCAGGTTGATTCATCAAACATACCTCTTTTCAGAATCGTGCACCAGGGTAAAAGTACCGTCGGTCCTGAGGCACAGGAAGACCACGCTTACCCCTTTGCTGGGGCATCAAATGTCAAAGTTCGCCTTGCTGTGGTGTCTTCCTCTGGAGGTTCAGTAACTTGGATGGATCTTCTCTGTGGAGAAAAAGACCAAACTAACCCTGATGAGGAATATTTGGCTCGGGTCAACTGGATGCATGGAAATATTCTCACTGCTCAGGTTCTAAACAGGTCACATTCCAAACTAAAGATCCTAAAGTTTGATATCAGAACGGGTGAAAGAGAAGTCTTGTTGGTAGAAGAACATGACACGTGGATCAATCTACACGATTGCTTTACACCTTTGGACAAGGGATTTGCTCAATCTTCGGGGGGGTTTCTATGGGCTAGCGAAAAAATGGGTTTTAGACATCTTTATCTGCACGATGCAGATGGTGTTTGCTTGGGACCAATAACCCAAGGTGATTGGATGGTTGAGCAAATTGCTGGAGTAAACGAGGCTGCAGGTCTTGTATATTTCAATGGAACTCTAGATAGCCCTTTGGAAAACCATCTTTATTGTGCTAAATTGTTTCCCGATTGGAGTTGTGCCTTGCAGACCCCGTTGAAATTGACTTCTGGCAAAGGAAAACATGTGGTTGTGCTTGATCATCAGATGCAGAGATTTGTCGATATTTATGATTCCTTGAATTCGCCCCCTAAAGTTTCACTTTTCTCCTTGCATGATGGAGGCTTGATTATGCATCTGTATGAACAATCTTTTACAGTTCCAAGATTTAAAAAGCTCCAACTTGATCCTCCAGAATTAGTTCAAATAATGGCCAAGGATGGGACCATTCTGTATGGGTCATTGTATAAACCCGATGTTGCTAGGTTTGGACCTCCACCTTACAAAACAATGGTTAGCGTGTACGGGGGTCCTTGTGTACAGCTTGTCTGTGATTCTTGGACCAACACTGTTGATATGAGAGCTCAGTATCTAAGAAGCAGAGGCCTGTTAGTGTGGAAGATGGACAACAGGGGAACTGCTCGACGCGGTCTAAAGTTTGAAGGTGCTCTAAAGTACAACTGTGGCATTATTGACACTGAGGATCAACTGGCTGGAGCCGAATGGCTCATCAAGCAAGGTTTAGCTCAAGTTGGCCACATCGGTTTGTATGGGTGGAGCTATGGCGGTTACCTCTCGGCTATGGCACTGGCGACGTTTCCCGATGTGTTTACTTGTGCTATTTCTGGCGCTCCCGTTACAGCGTGGGACGGGTACGACACGTTTTACACTGAAAAATATATGGGGTTGCCTTGTGAAAACAAATCGGGTTACTTGTACAGTTCTGTGATGCACCACGTAGCGAAGATCAAAGGGAAGTTGTTGCTCGTGCATGGTTTGATAGACGAAAACGTGCATTTTAGGCACACGGCGAGGCTGGTGAATGCATTAGTGGCAGCTCGAAAGGTCTACGAGTTGCTGATATTTCCAGATGAACGGCACATGCCTCGGCCGTGGCAGGACCGGCTTTACATGGAAGAGAGGATTTGGGAATTTATAGAGAGGAGTCTGTGA

Network for GWHGAAZE032695

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00930.22	DPPIV_N	136	488	2.00E-80
PF00326.22	Peptidase_S9	575	773	1.40E-49

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01278	DPP4, CD26	Protein digestion and absorption	map04974

Gene Ontology

GO term	Ontology	Name
GO:0006508	biological_process	proteolysis
GO:0008236	molecular_function	serine-type peptidase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	42.163
	SRR3591706	second leaf	26.745
	SRR3591707	mature leaf	31.498
	SRR3591708	Shoot apex	31.932
	SRR3591709	Stem	45.294
	SRR3591710	White floral bud	57.485
	SRR3591711	White flower	67.679
	SRR3591712	Green floral bud	51.323
	SRR3591713	Yellow flower	64.162
SRP173429	SRR8316895	Juvenile bud stage	23.691
	SRR8316896	Juvenile bud stage	27.875
	SRR8316897	Juvenile bud stage	12.663
	SRR8316894	Third green stage	14.353
	SRR8316900	Third green stage	45.285
	SRR8316901	Third green stage	40.659
	SRR8316898	Complete white stage	26.984
	SRR8316899	Complete white stage	70.987
	SRR8316903	Complete white stage	42.731
	SRR8316902	Silver flowering stage	30.239
	SRR8316904	Silver flowering stage	39.934
	SRR8316905	Silver flowering stage	18.681
	SRR8316906	Gold flowering stage	68.976
	SRR8316907	Gold flowering stage	67.167
	SRR8316908	Gold flowering stage	81.258
SRP132670	SRR6706286	Control	44.040
	SRR6706287	Light intensity 50%	48.855
	SRR6706288	Light intensity 20%	51.650
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	26.396
	CNS0095593	Slightly white alabastrum(diploid) 2	28.989
	CNS0095594	Slightly white alabastrum(diploid) 3	25.767
	CNS0095595	Whole white alabastrum(diploid) 2	26.609
	CNS0095596	Whole white alabastrum(diploid) 3	23.903
	CNS0095597	Whole white alabastrum(diploid) 4	22.990
	CNS0095598	Silvery flower (diploied) 1	39.181
	CNS0095599	Silvery flower (diploied) 2	31.885
	CNS0095600	Silvery flower (diploied) 3	66.635
	CNS0095601	Golden flower (diploid) 1	29.218
	CNS0095602	Golden flower (diploid) 2	65.339
	CNS0095603	Golden flower (diploid) 3	60.072
	CNS0095604	Slightly white alabastrum(tetraploid) 1	30.603
	CNS0095605	Slightly white alabastrum(tetraploid) 2	24.230
	CNS0095606	Slightly white alabastrum(tetraploid) 3	56.148
	CNS0095607	Whole white alabastrum(tetraploid) 1	20.170
	CNS0095608	Whole white alabastrum(tetraploid) 2	20.230
	CNS0095609	Whole white alabastrum(tetraploid) 3	45.003
	CNS0095610	Silvery flower (tetraploid) 1	84.666
	CNS0095611	Silvery flower (tetraploid) 2	78.023
	CNS0095612	Silvery flower (tetraploid) 3	77.981
	CNS0095613	Golden flower (tetraploid) 1	51.723
	CNS0095614	Golden flower (tetraploid) 2	88.248
	CNS0095615	Golden flower (tetraploid) 3	73.315
CRA001975	CRR073297	Stem 1	36.221
	CRR073298	Stem 2	34.911
	CRR073299	Stem 3	31.532
	CRR073300	Leaf 1	45.576
	CRR073301	Leaf 2	39.911
	CRR073302	Leaf 3	34.975
	CRR073303	Juvenile bud 1	46.229
	CRR073304	Juvenile bud 2	38.156
	CRR073305	Juvenile bud 3	53.882
	CRR073306	Third green 1	33.695
	CRR073307	Third green 2	28.296
	CRR073308	Third green 3	33.880
	CRR073309	Second white 1	31.432
	CRR073310	Second white 2	32.919
	CRR073311	Second white 3	34.865
	CRR073312	Silver flowering 1	24.833
	CRR073313	Silver flowering 2	20.400
	CRR073314	Silver flowering 3	22.495
	CRR073315	Gold flowering 1	18.321
	CRR073316	Gold flowering 2	37.460
	CRR073317	Gold flowering 3	20.089
	CRR073318	Tawny withering 1	41.194
	CRR073319	Tawny withering 2	32.925
	CRR073320	Tawny withering 3	37.552