Gene detail

Detail information of GWHGAAZE032600

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AID55346.1	0	EIN3-like protein EIL4 [Actinidia chinensis]
Swissprot	tr\|O23116\|EIL3_ARATH	1E-158	ETHYLENE INSENSITIVE 3-like 3 protein
trEMBL	tr\|A0A075EB47\|A0A075EB47_ACTCH	0	EIN3-like protein EIL4 {ECO:0000313\|EMBL:AID55346.1}
TAIR10	AT1G73730.1	3E-115	ETHYLENE-INSENSITIVE3-like 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000024	gene	271675	274387	-
GWHAAZE00000024	mRNA	271675	274387	-
GWHAAZE00000024	exon	271675	273673	-
GWHAAZE00000024	exon	274353	274387	-
GWHAAZE00000024	CDS	274353	274387	-
GWHAAZE00000024	CDS	271675	273673	-

Transcript Sequence
>GWHTAAZE032638 ATGGGTGTATTTGAAGAGATTGGGGTTGATATCAGCTCGGATATCGAAGTTGATGATGACATAAGGATTGACGATATAGAAGAGAAAGACGTGAGCGATGAAGAGATCGACCCAGAAGATTTAAAGAAGCGAATGTGGAAAGACAGTATTAAGCTCAAGAGAATCCAAGAAAGGAAGAAGAAAAAGCTCGAAGCCCAACAAGCCGCCGAGAAGCAAAAGAACAACAAGCATTCAGTCGATCATGCTCAACGCAAGAAAATGTCTAGAGCTCAAGATGGGATTTTGAAATACATGTTGAAGCTTATGGAAGTGTGCAAAGCCCGTGGATTCATCTACGGTATAATCCCCGAAAAGGGCAAACCTGTTAGCGGTTCGTCGGATAACCTAAGAGCGTGGTGGAAAGAAAAGGTGAAGTTTGACAAGAATGGACCAGCGGCTATAGCCAAGTTCGAAGCAGAGTGTATAGCCATGGGGGTGGAACACGGTTCTCAAAATGGGAACCCGCAAAGTGTTCTTCAAGATTTGCAAGACGCAACTTTAGGGTCGCTTTTGTCTTCATTGATCCAACATTGTAGCCCACCTCAGAGAAAGTACCCACTTGACAACGATGTACCGCCACCATGGTGGCCCACCGGTAGTGAAGAATGGTGGGCAATGTTAGGATTACCCGAGGGTCAGAGTCCGCCATACAAGAAGCCGCATGGTTTGAAGAAGATGTGGAAAGTTGGGGTTCTAACTGCTGTGATAAAGCATATGTCACCGGATATAGCAAAGATAAGGAAGCTAGTGCGGCAGTCAAAGTGCTTGCAGGATAAGATGACAGCTAAGGAGAGCTCGATTTGGTTGGGGGTTCTGAGCCGTGAGGATGCCCTTATTCGGCAGCCTAGTAGCGAAAACGGGGGGTCCGGGATAACGGAGCCGCCCTCCCGCCATAATGTTAAAACGACCAAACCTTCCAATAGTTGTGATAGTGACTATGATGTCGATGGCATAGATGATAGCGCGGTTTCTTTTTCGTCGATAAATGGTAAGAGAAACCGACCAATGGATACTGAGCCTTCGGGTCGTTCTAGCGTCCCCCCTGTAACGGTAGGGCATAAAGAGAAAAGGGAAGGGAAACCAACAAAAAAGCCAAGACATAAGCCTCGTGAGGGAACAAACACACTGACGGATATAAAGCAATCTGATTTACATTTGGCTCAGAACCAGACAAACATAAGACAACCCGAAAATGACACAAATACAGCTACGAGTCCTTTGGAGAAAGATAGTGAAATCGAATTACCATCACATATATCAGAGTTTAACAATTTCTCCAGTCTCGGTTTTGAGGGTAGTATGCCCTTAGTTTATCCGCCCAACCACGGTTCTTGGCACAGGCCCCACGAACCGGGGTTGGCTCCAGTACCCCAACCGTCTCCTTTTGAAAGTGGGCCCCAAAACAATGGTTCTTGGCATGGACCCCACGAGCCGGGGTTGGCTCATGTACCCCAATGGGCTTCGTTGGAAAGTGGGCACCAAAACAACAATTCTTGGCAGGGATCCCATGAGCCAGGGTTGGCTCGAGTGCCTCAACAATCTCCACTGGAAAGCAGGCCCCAAGATGACTATTCTTGGCATGGGCCCCATGAGCCGGGGTTGGCTCAAGTACCCCACCAGTCTCAGTTGGAAAGCGGGCCCCAAAATGATGCTTTGTTTTATGGACCTCAAAATGATGATTCAAACAAATACCCTACTTATGATCTCTATAACCCGCCTCTCACATTCGGGGCTAGTGGCAGTGAACAGCAGTCCCAGATGATATATAATGAACAACATCCAGTAAGGGCGGATTATGTGAAAGAAAGATTTCCAAATGAGCTAGATCGGACGGTTGAGAATCATTTCGGGTCCCCAATCAATAGCCTGTCGCTAGATTTTGGAGCATTGAATAGTCCGTTTAATTTCGGATTTGAAGGCACAACTTCTTTAGATCCAGACGACTTTTTACTTGATGAACTTGATGAAGAACTGATGCAGTGCTGCTGTGCGTAA

Network for GWHGAAZE032600

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04873.14	EIN3	39	288	3.90E-121

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	EIL

KEGG pathway

KO	Enzyme	pathway	mapID
K14514	EIN3	MAPK signaling pathway - plant	map04016
K14514	EIN3	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0005634	cellular_component	nucleus
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.063
	SRR3591707	mature leaf	0.025
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.025
	SRR3591710	White floral bud	4.144
	SRR3591711	White flower	6.632
	SRR3591712	Green floral bud	1.475
	SRR3591713	Yellow flower	6.294
SRP173429	SRR8316895	Juvenile bud stage	3.498
	SRR8316896	Juvenile bud stage	5.834
	SRR8316897	Juvenile bud stage	0.103
	SRR8316894	Third green stage	2.238
	SRR8316900	Third green stage	6.946
	SRR8316901	Third green stage	5.946
	SRR8316898	Complete white stage	4.571
	SRR8316899	Complete white stage	8.950
	SRR8316903	Complete white stage	8.725
	SRR8316902	Silver flowering stage	10.028
	SRR8316904	Silver flowering stage	11.590
	SRR8316905	Silver flowering stage	4.815
	SRR8316906	Gold flowering stage	16.701
	SRR8316907	Gold flowering stage	18.342
	SRR8316908	Gold flowering stage	5.727
SRP132670	SRR6706286	Control	7.717
	SRR6706287	Light intensity 50%	9.241
	SRR6706288	Light intensity 20%	8.896
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.596
	CNS0095593	Slightly white alabastrum(diploid) 2	4.598
	CNS0095594	Slightly white alabastrum(diploid) 3	4.477
	CNS0095595	Whole white alabastrum(diploid) 2	4.438
	CNS0095596	Whole white alabastrum(diploid) 3	2.716
	CNS0095597	Whole white alabastrum(diploid) 4	3.714
	CNS0095598	Silvery flower (diploied) 1	15.097
	CNS0095599	Silvery flower (diploied) 2	11.549
	CNS0095600	Silvery flower (diploied) 3	17.882
	CNS0095601	Golden flower (diploid) 1	9.945
	CNS0095602	Golden flower (diploid) 2	16.649
	CNS0095603	Golden flower (diploid) 3	18.502
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.022
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.044
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.115
	CNS0095611	Silvery flower (tetraploid) 2	0.161
	CNS0095612	Silvery flower (tetraploid) 3	0.157
	CNS0095613	Golden flower (tetraploid) 1	0.033
	CNS0095614	Golden flower (tetraploid) 2	0.049
	CNS0095615	Golden flower (tetraploid) 3	0.145
CRA001975	CRR073297	Stem 1	8.900
	CRR073298	Stem 2	6.897
	CRR073299	Stem 3	5.197
	CRR073300	Leaf 1	9.488
	CRR073301	Leaf 2	8.980
	CRR073302	Leaf 3	6.111
	CRR073303	Juvenile bud 1	4.580
	CRR073304	Juvenile bud 2	5.832
	CRR073305	Juvenile bud 3	6.724
	CRR073306	Third green 1	14.211
	CRR073307	Third green 2	9.247
	CRR073308	Third green 3	13.303
	CRR073309	Second white 1	13.073
	CRR073310	Second white 2	20.700
	CRR073311	Second white 3	25.730
	CRR073312	Silver flowering 1	19.318
	CRR073313	Silver flowering 2	18.638
	CRR073314	Silver flowering 3	21.666
	CRR073315	Gold flowering 1	3.592
	CRR073316	Gold flowering 2	5.490
	CRR073317	Gold flowering 3	3.125
	CRR073318	Tawny withering 1	6.902
	CRR073319	Tawny withering 2	9.572
	CRR073320	Tawny withering 3	9.264