Gene detail

Detail information of GWHGAAZE032579

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007222630.1	2.73961E-90	hypothetical protein PRUPE_ppa008520mg [Prunus persica]
COG	YP_001958461.1	2E-13	hypothetical protein Aasi_1443
Swissprot	tr\|Q0V7T5\|Y1864_ARATH	3E-76	Probable receptor-like protein kinase At1g80640 (Precursor)
trEMBL	tr\|M5XD13\|M5XD13_PRUPE	1E-90	Uncharacterized protein {ECO:0000313\|EMBL:EMJ23829.1}
TAIR10	AT1G80640.1	6E-64	Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000022	gene	135269	135991	-
GWHAAZE00000022	mRNA	135269	135991	-
GWHAAZE00000022	exon	135269	135991	-
GWHAAZE00000022	CDS	135269	135991	-

Transcript Sequence
>GWHTAAZE032617 ATGCACTGGGGATTTGGATGTGTATACAAGGCTCAGTTGGAAAAGAATTTACATGCTGCTGTAAAGAGACTAGTTGATGGAAATGTGTCCGCCATTACAGAATTTGAGAATGAGGTGCATTTGTTGAGTAAAATGCAGCATCCGAATATAATTTCTTTGTTAGGTTATAGCATTCATGGAGAAACTAGGCTTCTTGTTTATGAATTGATGGATAATAGATCTCTTGAATCTCAATTGCACGGACCTTCTCATAGATCAGCTTTACCATGGCATCTCAGGATGAAAATAGCTCTTGATATAGCAAAGGGATTAGAATATTTGCTCGAGCACTGCAACCCACAAGTTATCCATAGAGATCTGAAAACATCTAATATTCTCCTAGATTCCAGTAGAAAAGCCGTAGAAAAGCTAGCACTAATTCAATGCCAATCTATTGTCACATGTGCAATGCCTCAGCTCACAGACATATCAAAGCTTCCAAATATTGTGGATCATGTTCTCAGAAATACAATGGATATAAATCACTTATACCAGGTTGCAGCAGTAGCGGTGCTGTGTGTGCAACCAGAGCCAAGCTATCGTCCTTTAATAACCGAAGTATTACATTCTCATATTCCGCTAGTTTCGGTCGAGCTTGGAGGGACTTTCAGAGACATTTTTCCTCCTGTTGCCTCAGCTCACAGACAAATCAGAGGAATTTTTTTGGTATCCACGTTTGCTTAA

Network for GWHGAAZE032579

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	5	131	1.30E-22

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_RLCK-X

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.391
	SRR3591706	second leaf	1.269
	SRR3591707	mature leaf	1.243
	SRR3591708	Shoot apex	1.037
	SRR3591709	Stem	0.151
	SRR3591710	White floral bud	0.888
	SRR3591711	White flower	1.317
	SRR3591712	Green floral bud	1.187
	SRR3591713	Yellow flower	1.434
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.039
	SRR8316898	Complete white stage	0.030
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.071
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.301
	SRR8316907	Gold flowering stage	0.193
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.114
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.093
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.120
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.100
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.244
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.109
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.161
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.407
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.280
	CNS0095610	Silvery flower (tetraploid) 1	0.163
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.151
	CNS0095613	Golden flower (tetraploid) 1	0.087
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.055
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.125
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.109
	CRR073310	Second white 2	0.001
	CRR073311	Second white 3	0.111
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.070
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.073
	CRR073317	Gold flowering 3	0.055
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000