Gene detail

Detail information of GWHGAAZE032507

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011078887.1	0	PREDICTED: guanylate kinase 2-like [Sesamum indicum]
COG	YP_004280894.1	4E-49	guanylate kinase
Swissprot	tr\|Q9M682\|GMK2_ARATH	1E-166	Guanylate kinase 2
trEMBL	tr\|K4BHA4\|K4BHA4_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc03g063600.2.1}
TAIR10	AT3G57550.2	8E-126	guanylate kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000021	gene	3649337	3653022	-
GWHAAZE00000021	mRNA	3649337	3653022	-
GWHAAZE00000021	exon	3653020	3653022	-
GWHAAZE00000021	exon	3652806	3652913	-
GWHAAZE00000021	exon	3652639	3652709	-
GWHAAZE00000021	exon	3652422	3652551	-
GWHAAZE00000021	exon	3651445	3651786	-
GWHAAZE00000021	exon	3650484	3650605	-
GWHAAZE00000021	exon	3650262	3650397	-
GWHAAZE00000021	exon	3650137	3650182	-
GWHAAZE00000021	exon	3649922	3650024	-
GWHAAZE00000021	exon	3649337	3649697	-
GWHAAZE00000021	CDS	3653020	3653022	-
GWHAAZE00000021	CDS	3652806	3652913	-
GWHAAZE00000021	CDS	3652639	3652709	-
GWHAAZE00000021	CDS	3652422	3652551	-
GWHAAZE00000021	CDS	3651445	3651786	-
GWHAAZE00000021	CDS	3650484	3650605	-
GWHAAZE00000021	CDS	3650262	3650397	-
GWHAAZE00000021	CDS	3650137	3650182	-
GWHAAZE00000021	CDS	3649922	3650024	-
GWHAAZE00000021	CDS	3649583	3649697	-
GWHAAZE00000021	three_prime_UTR	3649337	3649582	-

Transcript Sequence
>GWHTAAZE032545 ATGGGGGAAGCACCAGCTTTCTTTGTAGATGATGTGCAGGAGAAATTCTCGGATGGGTTTAATCCGAAATCCAAGGGTCACAAAACAGCTACTTTTATTGGGGATAAAACATATGTGATTGGTGGGACGCATGATGAGTCAACCGTTGGAGTTCATATTTTTGACAGATCTACAGGTGAATGGATTATTCCTACTGTGTTGGGAACAAAGCCCAAGCCGTTTAAAGGCCATTCGGCTCTTCTTTTGAATGAAGACCGGATACTCGTCGTTAAGGGGAATTCGACCTCTGTTGACTGCACCTGGTTTCTTGAGGTGGATACACAGTTTGTAAGAGACCACAAAAAGAATTTCGGAGCCGATGTGGTGGCTTGGAGTAAGGGAGTTATAGGCGACGCTGAGAAGCCGATTGTTATAAGTGGCCCTTCTGGAGTTGGTAAGGGCACCTTAATAAATAAGCTAATGCAAGAATTCCCAGCCATGTTTGGATTCTCTGTAAGCCACACGACACGGGCTCCAAGGCAAAAGGAGATGGATGGTTTCCATTACCATTTCACAGACCGGAATGTTATGGAGAAAGAGATTAAGGCTGGGAAGTTCCTCGAGTTTGCTTCTGTTCATGGAAATCTTTATGGAACGAGCGTTGAAGCTGTTGAGAGATGCATCCTTGACATCGATGTTCAAGGGGCAAGGTCCGTGAGGGCTAGTTCTCTTGAAGCGATTTTCATCTTTATCTGCCCTCCCTCTTTTGAGGAGCTTGAGGAGCGGCTTCGTTCAAGGGGCACAGAAACTGAGGAACAGGTCCAAAAACGACTTCGTAATGCTAAGGCCGAGCTTGAACAGAGAAACTCGCCAGGCCTCTTTGATCATATTTTGGTAAATGATGACCTTGAAACTTGTTACCAAAGTCTTAAGAAACTATTGGGTCTGAATGAAATCGTCAACACTACCAACAAATCATCAACAAAAATGTTCGATCTTCCTATGGACCATTCGATATCAAAAATTGACCAGAAGATCCTCATAAACTGCAACACATGTGAAATAGATAAATCCTCAAACCTATTCGTGCTAGATATATCTTCAATTAAAGGAGGAGCACCAGGGCGAACAAGAGGGCTTCACATATATTCCGCAGATCATTTTGCTGATGGCGTGAACGGGGCGAAAAAATTCTAGCTAACTGCTGCAGACCCCCATTGGTACTAACGTAGTTTATCAATTCTATATAATCTTTTTGTTCCCTTTTTTCTTTAATTAAAGAAACCTAGACTGGGGTGAAGCTAAAATGTGATTTGGCGGAACGTTTTCTGTTTAATGTCGAGACAATCTTTGAAGTTGCATTTGAACAATTGATTTTCCCCTGTACACAAGAAATGATATATGATTTATAAGTTCTCCGTCATATTGAGGTGGTTAGATGGA

Network for GWHGAAZE032507

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00625.22	Guanylate_kin	133	307	4.20E-56

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00942	E2.7.4.8, gmk	Metabolic pathways	map01100
K00942	E2.7.4.8, gmk	Purine metabolism	map00230

Gene Ontology

GO term	Ontology	Name
GO:0006163	biological_process	purine nucleotide metabolic process
GO:0005515	molecular_function	protein binding
GO:0004385	molecular_function	guanylate kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	78.940
	SRR3591706	second leaf	28.452
	SRR3591707	mature leaf	29.225
	SRR3591708	Shoot apex	38.597
	SRR3591709	Stem	85.068
	SRR3591710	White floral bud	140.267
	SRR3591711	White flower	107.803
	SRR3591712	Green floral bud	90.998
	SRR3591713	Yellow flower	108.540
SRP173429	SRR8316895	Juvenile bud stage	38.058
	SRR8316896	Juvenile bud stage	79.857
	SRR8316897	Juvenile bud stage	39.280
	SRR8316894	Third green stage	44.013
	SRR8316900	Third green stage	155.560
	SRR8316901	Third green stage	162.441
	SRR8316898	Complete white stage	180.771
	SRR8316899	Complete white stage	176.383
	SRR8316903	Complete white stage	228.755
	SRR8316902	Silver flowering stage	58.058
	SRR8316904	Silver flowering stage	113.521
	SRR8316905	Silver flowering stage	50.078
	SRR8316906	Gold flowering stage	161.883
	SRR8316907	Gold flowering stage	145.353
	SRR8316908	Gold flowering stage	128.599
SRP132670	SRR6706286	Control	107.443
	SRR6706287	Light intensity 50%	123.850
	SRR6706288	Light intensity 20%	119.799
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	82.009
	CNS0095593	Slightly white alabastrum(diploid) 2	100.259
	CNS0095594	Slightly white alabastrum(diploid) 3	76.622
	CNS0095595	Whole white alabastrum(diploid) 2	72.858
	CNS0095596	Whole white alabastrum(diploid) 3	92.868
	CNS0095597	Whole white alabastrum(diploid) 4	78.486
	CNS0095598	Silvery flower (diploied) 1	30.725
	CNS0095599	Silvery flower (diploied) 2	41.495
	CNS0095600	Silvery flower (diploied) 3	125.685
	CNS0095601	Golden flower (diploid) 1	30.182
	CNS0095602	Golden flower (diploid) 2	82.129
	CNS0095603	Golden flower (diploid) 3	78.893
	CNS0095604	Slightly white alabastrum(tetraploid) 1	98.156
	CNS0095605	Slightly white alabastrum(tetraploid) 2	86.266
	CNS0095606	Slightly white alabastrum(tetraploid) 3	127.569
	CNS0095607	Whole white alabastrum(tetraploid) 1	61.028
	CNS0095608	Whole white alabastrum(tetraploid) 2	64.314
	CNS0095609	Whole white alabastrum(tetraploid) 3	113.115
	CNS0095610	Silvery flower (tetraploid) 1	107.181
	CNS0095611	Silvery flower (tetraploid) 2	52.734
	CNS0095612	Silvery flower (tetraploid) 3	119.478
	CNS0095613	Golden flower (tetraploid) 1	94.119
	CNS0095614	Golden flower (tetraploid) 2	136.286
	CNS0095615	Golden flower (tetraploid) 3	105.670
CRA001975	CRR073297	Stem 1	61.544
	CRR073298	Stem 2	66.762
	CRR073299	Stem 3	48.389
	CRR073300	Leaf 1	112.918
	CRR073301	Leaf 2	114.124
	CRR073302	Leaf 3	89.428
	CRR073303	Juvenile bud 1	95.852
	CRR073304	Juvenile bud 2	127.853
	CRR073305	Juvenile bud 3	102.616
	CRR073306	Third green 1	93.993
	CRR073307	Third green 2	79.367
	CRR073308	Third green 3	89.371
	CRR073309	Second white 1	79.541
	CRR073310	Second white 2	80.714
	CRR073311	Second white 3	61.836
	CRR073312	Silver flowering 1	65.511
	CRR073313	Silver flowering 2	58.736
	CRR073314	Silver flowering 3	65.174
	CRR073315	Gold flowering 1	9.796
	CRR073316	Gold flowering 2	10.586
	CRR073317	Gold flowering 3	13.504
	CRR073318	Tawny withering 1	37.867
	CRR073319	Tawny withering 2	36.934
	CRR073320	Tawny withering 3	50.854