Gene detail

Detail information of GWHGAAZE032379

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP27679.1	1.30034E-76	hypothetical protein JCGZ_20099 [Jatropha curcas]
COG	YP_003115244.1	1E-10	serine/threonine protein kinase
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	5E-75	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RZ14\|A0A022RZ14_ERYGU	6E-85	Uncharacterized protein {ECO:0000313\|EMBL:EYU44215.1}
TAIR10	AT3G51550.1	2E-69	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000020	gene	279402	283060	-
GWHAAZE00000020	mRNA	279402	283060	-
GWHAAZE00000020	exon	279402	279470	-
GWHAAZE00000020	exon	280061	280211	-
GWHAAZE00000020	exon	280335	280597	-
GWHAAZE00000020	exon	281041	281246	-
GWHAAZE00000020	exon	281635	282333	-
GWHAAZE00000020	exon	282478	282943	-
GWHAAZE00000020	exon	283019	283060	-
GWHAAZE00000020	CDS	283019	283060	-
GWHAAZE00000020	CDS	282478	282943	-
GWHAAZE00000020	CDS	281635	282333	-
GWHAAZE00000020	CDS	281041	281246	-
GWHAAZE00000020	CDS	280335	280597	-
GWHAAZE00000020	CDS	280061	280211	-
GWHAAZE00000020	CDS	279402	279470	-

Transcript Sequence
>GWHTAAZE032417 ATGAGCTTCCATTTTGGCCTTGTAAACACAATTGCAACTGCAAATTCGGACATTTCATCATCCCAACAAATAGCAGAGGCAAACCTTGGCGAGAATATAGAAGTATTAACACCGCAACAACACCAGGAAGTGAACCTTGACGAGGATTCAAGCATACCACCGTCGTTGAAATCAGAACAATTATGCCGTCATTTTTCACTTGCTCATATCCTATTGGCCACCAACAACTTTGAAGATGCATTAATCATTGGTCAGGGTGGATTTGGGAAGGTGTACAAAGGGGTCATCGATGATGGGACAGTTACTGTTGCCATAAAGAGGTTAAGTCCTACGTCCAAACAAGGGGCACCCCAATTTTGGACAGAGGTGGAGTTGCTTTCTAAATTTCGGCACAGCCATCATGTTTCACTAATTGGTTACTGTTACAATCGCGATGAGATGATACTTGTTTATGTGTACATGGCTCGTGGAACCCTCGCGGATCATCTGTACAAACTTGGTCCGAATGATGATAGCTGGGCAGCTAAGGTATCAGATTTTGGGCTGTCTAAAATTGGCCCAGCAAATCAGTCCGCCTCCGCCTCATCACATGTCAGTACCAATGTAAAAGGCACATTTGGGTATGTGGATCCTGAGTATTTGGTGACCCATAGACTCACTCGAAAGTCTGACGTTTACTCCTTTGGCGTTGTCTTGTTAGAAGTGTTGTCCGGGAGGCGGACTGTAGATTTAAATCGCTGTGAGGAGCAGTGGGATCTTGCTGGATGGGCTAAAGAATGCATAAAGAAAGGAGAACTAGATCAGATTATTGACCCGAATTTGAGATGGCAAATCTTGCAAAGTTCTTTGTCAGCATTTGTGAAAATAGCAGATCAATGCTTGCATTATCGTTCGAAAAAACACCCTACAATGGCTGAGGTGGTGGCCTCGCTTGAGTCCGCATTGGCATTGCAAGAGAGAAGAGATTCTTCAATGTTTGAGGCGGATTTTTTTAATTTAGGAGGGACTTTTGACAACCAAGAGAATCTGGATAATTCCTTACTAGAATCCGAGGTGAATAATGGTGGTGATGGTGAGCATCTGGGCGAAGAGACAGATAATATTTTGTCATCCAGTGAGGCAAGCAATTTGCAGAAGCATGTAAGGCCTGCCAGAATGACACCGTTCAAAAGGATGGCATGGCTGTTTTTCTTTGGGAAACCTCGAGGTATTCTATTGATTCCCATTCTGAGATTTTACTTTGTTGAAGCAGCAAGTGAAATAAGCAACTTGGAATCCCTACGACATGACTTTGGTAGCATTAGAAGCAACTCAGAATCCCTACAATACGACTTTGGTACGCTTAGGGTTGCGACAGATAATTTCTCTGATGCTAACAAGCTCGGAAATGGTGCATTTGGAGTTGTGTTCAAGAAATTTTCTTTCGTTGGGTGTGCAGATCCAATCAAGCGTGCAACCTTGGATTGGGAACAGCGTTATAAAATCATAAGAGGTGTTGCTCAGGGGCTTGTTTATCTTCATGAAGATTCTCCCGTGCGGATTACTCATCATCATGTCAAACCTAGCAACATTCTATTAGATACAGAGATGTACCCGAAAATTTCTGATTTTTGCTTCGCAAAGTTGTGTAATCGGGAAGGAAGCGAAAAGCTTGCAACCAGTTTTGTGGGGACTTTTGGGTACATGGCACCGGAGTACATAATGGAAGGTTGTATCTCAGTTAAATCAGATGTGTTTGGCTTCGGCGTGTTGATTCTTCAAATCATAAGTGGTCTAGGAAGCTATCTTTTATACCCTGAGGAAAACCCAAAGGACCTTCCGACCTATGGTATCTACACGGCTAACTACCATAGTGGTGGGGATGTTCATGAGTGGAGGCGCAGCATTGGCATCAGC

Network for GWHGAAZE032379

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	83	165	2.10E-14
PF00069.26	Pkinase	175	309	9.20E-13
PF00069.26	Pkinase	485	591	1.40E-21

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_DLSV

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.136
	SRR3591706	second leaf	0.132
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.207
	SRR3591709	Stem	0.794
	SRR3591710	White floral bud	0.187
	SRR3591711	White flower	0.300
	SRR3591712	Green floral bud	0.055
	SRR3591713	Yellow flower	0.046
SRP173429	SRR8316895	Juvenile bud stage	0.019
	SRR8316896	Juvenile bud stage	0.004
	SRR8316897	Juvenile bud stage	0.151
	SRR8316894	Third green stage	0.010
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.004
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.027
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.010
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.032
	CNS0095594	Slightly white alabastrum(diploid) 3	0.003
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.001
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.003
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.028
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.024
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.040
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.004
	CNS0095610	Silvery flower (tetraploid) 1	0.238
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.018
	CNS0095613	Golden flower (tetraploid) 1	0.009
	CNS0095614	Golden flower (tetraploid) 2	0.169
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.049
	CRR073301	Leaf 2	0.004
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.034
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.070
	CRR073320	Tawny withering 3	0.044