Gene detail

Detail information of GWHGAAZE032265

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU45302.1	1.6005E-82	hypothetical protein MIMGU_mgv1a012383mg [Erythranthe guttata]
COG	YP_001321257.1	9E-36	6-phosphogluconolactonase
Swissprot	tr\|A2Z3C4\|6PGL4_ORYSI	4E-73	Probable 6-phosphogluconolactonase 4, chloroplastic (Precursor)
trEMBL	tr\|A0A022RXR9\|A0A022RXR9_ERYGU	6E-83	Uncharacterized protein {ECO:0000313\|EMBL:EYU45302.1}
TAIR10	AT5G24400.1	5E-55	NagB/RpiA/CoA transferase-like superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000014	gene	20741	23122	-
GWHAAZE00000014	mRNA	20741	23122	-
GWHAAZE00000014	exon	20741	21106	-
GWHAAZE00000014	exon	22275	22393	-
GWHAAZE00000014	exon	22978	23122	-
GWHAAZE00000014	CDS	22978	23122	-
GWHAAZE00000014	CDS	22275	22393	-
GWHAAZE00000014	CDS	20741	21106	-

Transcript Sequence
>GWHTAAZE032303 ATGTCGTCAATGGCAAGGGTGTGCAAGAAGATTCTCGAGTTCGATTCCGAAGAAGATATGGCTGTGGATCTGTCAGCAAAAATTTCCAAACTCTCAGCTAAACATATCAAAGAAAAAGGTTCTTTCACCGTTGTTCTCTCTGGAGTGGAAAAAGGCGACGTGGATTGGTCCAAATGGGTAATTTTTTTCTTGGATGAGAGGGTTGTTCCTCTCACTGATCCGGACAGCAACTATAAACTTGCCTATGATGGGTTTCTTTGCAAGGTAGGAATTCCAAAGTCAAATATTTATTGCATAAAGGAAAAAGTTACACCGGAAGAAGCAGCGGATGATTATGAGGCCTGTCTAAAGCAATTGGTGGCCAACAAGACATTACCACTTTCACCAAATGGTTTCCCAATTTTTGACTTGATGCTGCTAGGAATGGGGCCAGAGGGACATGTAGCTTCGCTCTTCTGTTGGCATTTTCAGCGCTACGAGACCCAGAGGTGGATTACCTTCATAAAGGCCTCGCCTAAACCACCCGCGGAGAGGATCACAATGACGTTTCCAGTAATAAACGCGTCTAAGCATATAGCAATGGTGGTGACAGGAAAGGAGGTAGCGGCCGGTCAAAGTGGCACTGCATGA

Network for GWHGAAZE032265

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01182.21	Glucosamine_iso	16	200	1.40E-50

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01057	PGLS, pgl, devB	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Pentose phosphate pathway	map00030

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0006098	biological_process	pentose-phosphate shunt
GO:0017057	molecular_function	6-phosphogluconolactonase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.599
	SRR3591706	second leaf	3.433
	SRR3591707	mature leaf	5.610
	SRR3591708	Shoot apex	11.498
	SRR3591709	Stem	0.715
	SRR3591710	White floral bud	8.795
	SRR3591711	White flower	9.610
	SRR3591712	Green floral bud	28.594
	SRR3591713	Yellow flower	9.282
SRP173429	SRR8316895	Juvenile bud stage	78.254
	SRR8316896	Juvenile bud stage	64.783
	SRR8316897	Juvenile bud stage	73.994
	SRR8316894	Third green stage	23.138
	SRR8316900	Third green stage	75.582
	SRR8316901	Third green stage	73.331
	SRR8316898	Complete white stage	16.571
	SRR8316899	Complete white stage	59.240
	SRR8316903	Complete white stage	19.504
	SRR8316902	Silver flowering stage	38.632
	SRR8316904	Silver flowering stage	37.764
	SRR8316905	Silver flowering stage	23.026
	SRR8316906	Gold flowering stage	188.359
	SRR8316907	Gold flowering stage	166.494
	SRR8316908	Gold flowering stage	107.265
SRP132670	SRR6706286	Control	38.597
	SRR6706287	Light intensity 50%	39.528
	SRR6706288	Light intensity 20%	42.772
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	22.572
	CNS0095593	Slightly white alabastrum(diploid) 2	15.930
	CNS0095594	Slightly white alabastrum(diploid) 3	21.395
	CNS0095595	Whole white alabastrum(diploid) 2	11.633
	CNS0095596	Whole white alabastrum(diploid) 3	12.981
	CNS0095597	Whole white alabastrum(diploid) 4	13.516
	CNS0095598	Silvery flower (diploied) 1	22.215
	CNS0095599	Silvery flower (diploied) 2	14.691
	CNS0095600	Silvery flower (diploied) 3	116.939
	CNS0095601	Golden flower (diploid) 1	32.415
	CNS0095602	Golden flower (diploid) 2	144.673
	CNS0095603	Golden flower (diploid) 3	137.305
	CNS0095604	Slightly white alabastrum(tetraploid) 1	14.218
	CNS0095605	Slightly white alabastrum(tetraploid) 2	9.792
	CNS0095606	Slightly white alabastrum(tetraploid) 3	44.082
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.355
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.474
	CNS0095609	Whole white alabastrum(tetraploid) 3	21.121
	CNS0095610	Silvery flower (tetraploid) 1	83.402
	CNS0095611	Silvery flower (tetraploid) 2	103.250
	CNS0095612	Silvery flower (tetraploid) 3	53.437
	CNS0095613	Golden flower (tetraploid) 1	137.648
	CNS0095614	Golden flower (tetraploid) 2	127.056
	CNS0095615	Golden flower (tetraploid) 3	14.194
CRA001975	CRR073297	Stem 1	47.620
	CRR073298	Stem 2	38.944
	CRR073299	Stem 3	76.774
	CRR073300	Leaf 1	30.491
	CRR073301	Leaf 2	29.141
	CRR073302	Leaf 3	38.525
	CRR073303	Juvenile bud 1	28.510
	CRR073304	Juvenile bud 2	30.210
	CRR073305	Juvenile bud 3	35.638
	CRR073306	Third green 1	35.264
	CRR073307	Third green 2	13.028
	CRR073308	Third green 3	24.738
	CRR073309	Second white 1	57.394
	CRR073310	Second white 2	36.489
	CRR073311	Second white 3	97.102
	CRR073312	Silver flowering 1	64.246
	CRR073313	Silver flowering 2	42.221
	CRR073314	Silver flowering 3	54.739
	CRR073315	Gold flowering 1	1.578
	CRR073316	Gold flowering 2	2.276
	CRR073317	Gold flowering 3	1.262
	CRR073318	Tawny withering 1	1.023
	CRR073319	Tawny withering 2	3.616
	CRR073320	Tawny withering 3	0.278