Detail information of GWHGAAZE032147


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrABJ91216.10CBL-interacting protein kinase 9 [Populus trichocarpa]
COGYP_002432751.12E-39serine/threonine protein kinase
Swissprottr|O65554|CIPK6_ARATH0CBL-interacting serine/threonine-protein kinase 6
trEMBLtr|A0MNJ6|A0MNJ6_POPTR0CBL-interacting protein kinase 9 {ECO:0000313|EMBL:ABJ91216.1}
TAIR10AT4G30960.15E-176SOS3-interacting protein 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene7156294471564751-
GWHAAZE00000009mRNA7156294471564751-
GWHAAZE00000009exon7156294471563371-
GWHAAZE00000009exon7156388171564751-
GWHAAZE00000009CDS7156388171564751-
GWHAAZE00000009CDS7156294471563371-
Transcript Sequence

Network for GWHGAAZE032147

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase142681.40E-74
PF03822.15NAF3003592.90E-21
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-CHK1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0007165biological_processsignal transduction
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf323.053
SRR3591706second leaf64.135
SRR3591707mature leaf245.514
SRR3591708Shoot apex45.825
SRR3591709Stem264.361
SRR3591710White floral bud800.779
SRR3591711White flower318.199
SRR3591712Green floral bud405.089
SRR3591713Yellow flower144.466
SRP173429 SRR8316895Juvenile bud stage 141.904
SRR8316896Juvenile bud stage 195.566
SRR8316897Juvenile bud stage 71.808
SRR8316894Third green stage 149.928
SRR8316900Third green stage 568.844
SRR8316901Third green stage 429.001
SRR8316898Complete white stage 527.275
SRR8316899Complete white stage 920.226
SRR8316903Complete white stage 759.722
SRR8316902Silver flowering stage134.284
SRR8316904Silver flowering stage215.517
SRR8316905Silver flowering stage93.946
SRR8316906Gold flowering stage 161.350
SRR8316907Gold flowering stage 241.318
SRR8316908Gold flowering stage 250.598
SRP132670SRR6706286Control730.265
SRR6706287Light intensity 50%752.071
SRR6706288Light intensity 20%772.381
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1148.289
CNS0095593Slightly white alabastrum(diploid) 2195.074
CNS0095594Slightly white alabastrum(diploid) 3165.763
CNS0095595Whole white alabastrum(diploid) 2209.483
CNS0095596Whole white alabastrum(diploid) 3229.420
CNS0095597Whole white alabastrum(diploid) 4195.826
CNS0095598Silvery flower (diploied) 1257.172
CNS0095599Silvery flower (diploied) 2173.883
CNS0095600Silvery flower (diploied) 3224.636
CNS0095601Golden flower (diploid) 1135.152
CNS0095602Golden flower (diploid) 2168.780
CNS0095603Golden flower (diploid) 3159.853
CNS0095604Slightly white alabastrum(tetraploid) 1306.785
CNS0095605Slightly white alabastrum(tetraploid) 2279.789
CNS0095606Slightly white alabastrum(tetraploid) 3572.134
CNS0095607Whole white alabastrum(tetraploid) 1180.342
CNS0095608Whole white alabastrum(tetraploid) 2215.607
CNS0095609Whole white alabastrum(tetraploid) 3551.560
CNS0095610Silvery flower (tetraploid) 1226.830
CNS0095611Silvery flower (tetraploid) 2181.077
CNS0095612Silvery flower (tetraploid) 3198.486
CNS0095613Golden flower (tetraploid) 1106.835
CNS0095614Golden flower (tetraploid) 2139.823
CNS0095615Golden flower (tetraploid) 354.721
CRA001975CRR073297Stem 1235.293
CRR073298Stem 2220.406
CRR073299Stem 3217.247
CRR073300Leaf 1357.938
CRR073301Leaf 2317.870
CRR073302Leaf 3334.352
CRR073303Juvenile bud 1474.859
CRR073304Juvenile bud 2331.909
CRR073305Juvenile bud 3551.305
CRR073306Third green 1625.080
CRR073307Third green 2519.770
CRR073308Third green 3526.740
CRR073309Second white 192.195
CRR073310Second white 2132.145
CRR073311Second white 386.251
CRR073312Silver flowering 156.106
CRR073313Silver flowering 239.888
CRR073314Silver flowering 347.588
CRR073315Gold flowering 1107.664
CRR073316Gold flowering 2105.339
CRR073317Gold flowering 399.084
CRR073318Tawny withering 1102.129
CRR073319Tawny withering 258.623
CRR073320Tawny withering 3138.944