Gene detail

Detail information of GWHGAAZE032136

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010652439.1	4.36037E-72	PREDICTED: dihydroneopterin aldolase-like [Vitis vinifera]
COG	YP_003320173.1	2E-38	dihydroneopterin aldolase
Swissprot	tr\|Q9SF23\|FOLB1_ARATH	3E-52	Dihydroneopterin aldolase 1 {ECO:0000305}
trEMBL	tr\|F6HZT1\|F6HZT1_VITVI	2E-73	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB60197.1}
TAIR10	AT3G11750.1	4E-42	Dihydroneopterin aldolase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	71225148	71226918	+
GWHAAZE00000009	mRNA	71225148	71226918	+
GWHAAZE00000009	exon	71225148	71225297	+
GWHAAZE00000009	exon	71226353	71226415	+
GWHAAZE00000009	exon	71226493	71226918	+
GWHAAZE00000009	CDS	71225148	71225297	+
GWHAAZE00000009	CDS	71226353	71226415	+
GWHAAZE00000009	CDS	71226493	71226918	+

Transcript Sequence
>GWHTAAZE032174 ATGAACAATCCAAAAGAGTATGATATAGAAGCTATTACGGGTAATGAAATAGAGTACATTGAGTTTGATTTGATGCTGGGCGTTGCTGATCTTCATGCCCCTGAGGCTGCTGCTGCAGCTGAATCTGCAATTTCTTCAAGTTATCAACCGGCAGTGAATTTAGAGAACCTGAAGGAGGCCCTAAAAGTCGATGTTCCGGATTCAAACCTTTCTGGATTTTCTGATTTGATCCAAATGGGTGATGACGGGGAGATGATAAAGGGAGACAGACTTGTGCTTAGGGGGCTAATGTTCCATGGTTTTCATGGTGTGAAACCCGAAGAAAGGAAATTGGGGCAGAAGTTTTTGATAGATGTAGACGCCTGGATGGATCTCCGACCAGCAGGTAAATCTGACAACCTGTCTGATACTATCAGTTATACTGATATCTACCGCATTGTTAGAGATGTTGTAGAGGGATCACCTCAAAATCTTCTAGAGTCGGTTGCTGAACTCGTTGCGTCTACGACTCTAACCAAATTCCCACGTATAATGGCTGTGCGTGTGAAGGTTGGGAAGCCTCATGTTGCTGTTCTTGGTCCTGTTGATTACTTGGGAGTCGAGATTGTCAGATATAGAAACATCAGCTCTCCCGTTTGA

Network for GWHGAAZE032136

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02152.19	FolB	92	202	6.00E-32

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01633	folB	Metabolic pathways	map01100
K01633	folB	Folate biosynthesis	map00790

Gene Ontology

GO term	Ontology	Name
GO:0006760	biological_process	folic acid-containing compound metabolic process
GO:0004150	molecular_function	dihydroneopterin aldolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	18.421
	SRR3591706	second leaf	10.283
	SRR3591707	mature leaf	8.022
	SRR3591708	Shoot apex	18.979
	SRR3591709	Stem	14.584
	SRR3591710	White floral bud	6.471
	SRR3591711	White flower	7.438
	SRR3591712	Green floral bud	11.258
	SRR3591713	Yellow flower	6.006
SRP173429	SRR8316895	Juvenile bud stage	12.607
	SRR8316896	Juvenile bud stage	15.497
	SRR8316897	Juvenile bud stage	8.269
	SRR8316894	Third green stage	7.553
	SRR8316900	Third green stage	20.405
	SRR8316901	Third green stage	16.821
	SRR8316898	Complete white stage	3.727
	SRR8316899	Complete white stage	25.722
	SRR8316903	Complete white stage	8.518
	SRR8316902	Silver flowering stage	5.138
	SRR8316904	Silver flowering stage	5.062
	SRR8316905	Silver flowering stage	3.170
	SRR8316906	Gold flowering stage	9.614
	SRR8316907	Gold flowering stage	9.482
	SRR8316908	Gold flowering stage	9.289
SRP132670	SRR6706286	Control	5.536
	SRR6706287	Light intensity 50%	6.319
	SRR6706288	Light intensity 20%	5.582
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	15.337
	CNS0095593	Slightly white alabastrum(diploid) 2	14.031
	CNS0095594	Slightly white alabastrum(diploid) 3	15.898
	CNS0095595	Whole white alabastrum(diploid) 2	13.801
	CNS0095596	Whole white alabastrum(diploid) 3	11.955
	CNS0095597	Whole white alabastrum(diploid) 4	11.679
	CNS0095598	Silvery flower (diploied) 1	14.329
	CNS0095599	Silvery flower (diploied) 2	13.266
	CNS0095600	Silvery flower (diploied) 3	14.086
	CNS0095601	Golden flower (diploid) 1	11.722
	CNS0095602	Golden flower (diploid) 2	13.859
	CNS0095603	Golden flower (diploid) 3	13.538
	CNS0095604	Slightly white alabastrum(tetraploid) 1	16.399
	CNS0095605	Slightly white alabastrum(tetraploid) 2	13.061
	CNS0095606	Slightly white alabastrum(tetraploid) 3	20.866
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.817
	CNS0095608	Whole white alabastrum(tetraploid) 2	8.934
	CNS0095609	Whole white alabastrum(tetraploid) 3	12.676
	CNS0095610	Silvery flower (tetraploid) 1	13.328
	CNS0095611	Silvery flower (tetraploid) 2	14.824
	CNS0095612	Silvery flower (tetraploid) 3	11.578
	CNS0095613	Golden flower (tetraploid) 1	9.659
	CNS0095614	Golden flower (tetraploid) 2	12.238
	CNS0095615	Golden flower (tetraploid) 3	11.879
CRA001975	CRR073297	Stem 1	13.500
	CRR073298	Stem 2	12.579
	CRR073299	Stem 3	12.496
	CRR073300	Leaf 1	12.511
	CRR073301	Leaf 2	13.779
	CRR073302	Leaf 3	13.291
	CRR073303	Juvenile bud 1	18.926
	CRR073304	Juvenile bud 2	12.756
	CRR073305	Juvenile bud 3	14.839
	CRR073306	Third green 1	2.272
	CRR073307	Third green 2	4.297
	CRR073308	Third green 3	3.322
	CRR073309	Second white 1	6.015
	CRR073310	Second white 2	5.425
	CRR073311	Second white 3	3.864
	CRR073312	Silver flowering 1	5.133
	CRR073313	Silver flowering 2	5.669
	CRR073314	Silver flowering 3	2.514
	CRR073315	Gold flowering 1	5.886
	CRR073316	Gold flowering 2	6.909
	CRR073317	Gold flowering 3	5.228
	CRR073318	Tawny withering 1	11.902
	CRR073319	Tawny withering 2	14.901
	CRR073320	Tawny withering 3	15.772