Detail information of GWHGAAZE032128


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAF27113.1AC018849_11.6558E-41aha9, 5' partial; 1-2403 [Arabidopsis thaliana]
COGYP_003483529.10.0000001plasma-membrane proton-efflux P-type ATPase
Swissprottr|Q42556|PMA9_ARATH3E-43ATPase 9, plasma membrane-type
trEMBLtr|U6C2U0|U6C2U0_NICAL1E-41Predicted H+ ATPase ortholog {ECO:0000313|EMBL:BAO02511.1}
TAIR10AT1G80660.13E-38H(+)-ATPase 9

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene7113807871139095-
GWHAAZE00000009mRNA7113807871139095-
GWHAAZE00000009exon7113807871138191-
GWHAAZE00000009exon7113885371139095-
GWHAAZE00000009CDS7113885371139095-
GWHAAZE00000009CDS7113807871138191-
Transcript Sequence

Network for GWHGAAZE032128

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01535PMA1, PMA2 Metabolic pathways map01100
Oxidative phosphorylationmap00190

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.578
SRR3591707mature leaf0.000
SRR3591708Shoot apex1.329
SRR3591709Stem0.043
SRR3591710White floral bud0.709
SRR3591711White flower0.215
SRR3591712Green floral bud0.554
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.240
SRR8316896Juvenile bud stage 0.714
SRR8316897Juvenile bud stage 0.220
SRR8316894Third green stage 0.438
SRR8316900Third green stage 1.257
SRR8316901Third green stage 0.888
SRR8316898Complete white stage 0.199
SRR8316899Complete white stage 0.430
SRR8316903Complete white stage 0.005
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.079
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.625
SRR6706287Light intensity 50%0.989
SRR6706288Light intensity 20%0.971
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.354
CNS0095593Slightly white alabastrum(diploid) 20.802
CNS0095594Slightly white alabastrum(diploid) 31.624
CNS0095595Whole white alabastrum(diploid) 20.586
CNS0095596Whole white alabastrum(diploid) 32.356
CNS0095597Whole white alabastrum(diploid) 40.494
CNS0095598Silvery flower (diploied) 11.584
CNS0095599Silvery flower (diploied) 21.465
CNS0095600Silvery flower (diploied) 30.048
CNS0095601Golden flower (diploid) 10.238
CNS0095602Golden flower (diploid) 20.175
CNS0095603Golden flower (diploid) 30.418
CNS0095604Slightly white alabastrum(tetraploid) 11.734
CNS0095605Slightly white alabastrum(tetraploid) 21.263
CNS0095606Slightly white alabastrum(tetraploid) 32.278
CNS0095607Whole white alabastrum(tetraploid) 10.729
CNS0095608Whole white alabastrum(tetraploid) 20.598
CNS0095609Whole white alabastrum(tetraploid) 31.762
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.554
CNS0095612Silvery flower (tetraploid) 30.023
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.136
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 13.284
CRR073298Stem 22.647
CRR073299Stem 31.026
CRR073300Leaf 12.616
CRR073301Leaf 22.736
CRR073302Leaf 31.066
CRR073303Juvenile bud 10.200
CRR073304Juvenile bud 21.023
CRR073305Juvenile bud 30.156
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.007
CRR073309Second white 10.540
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.264
CRR073316Gold flowering 21.574
CRR073317Gold flowering 30.188
CRR073318Tawny withering 10.311
CRR073319Tawny withering 20.242
CRR073320Tawny withering 31.730