Detail information of GWHGAAZE032028


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010112073.11.9618E-46ATP-dependent Clp protease ATP-binding subunit ClpX [Morus notabilis]
COGYP_004770824.12E-11ATP-dependent protease ATP-binding subunit ClpX
trEMBLtr|W9SK38|W9SK38_9ROSA7E-47ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000313|EMBL:EXC32492.1}
TAIR10AT1G33360.13E-32ATP-dependent Clp protease

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6926122369262553+
GWHAAZE00000009mRNA6926122369262553+
GWHAAZE00000009exon6926122369261231+
GWHAAZE00000009exon6926195169262073+
GWHAAZE00000009exon6926236269262553+
GWHAAZE00000009CDS6926122369261231+
GWHAAZE00000009CDS6926195169262073+
GWHAAZE00000009CDS6926236269262553+
Transcript Sequence

Network for GWHGAAZE032028

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10431.10ClpB_D2-small4462.70E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03544clpX, CLPX Cell cycle - Caulobacter map04112

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf43.215
SRR3591706second leaf27.424
SRR3591707mature leaf29.185
SRR3591708Shoot apex29.062
SRR3591709Stem51.701
SRR3591710White floral bud65.676
SRR3591711White flower63.493
SRR3591712Green floral bud65.864
SRR3591713Yellow flower69.696
SRP173429 SRR8316895Juvenile bud stage 24.094
SRR8316896Juvenile bud stage 31.385
SRR8316897Juvenile bud stage 13.704
SRR8316894Third green stage 15.146
SRR8316900Third green stage 36.038
SRR8316901Third green stage 45.785
SRR8316898Complete white stage 19.133
SRR8316899Complete white stage 40.248
SRR8316903Complete white stage 32.452
SRR8316902Silver flowering stage21.363
SRR8316904Silver flowering stage25.487
SRR8316905Silver flowering stage13.995
SRR8316906Gold flowering stage 48.885
SRR8316907Gold flowering stage 51.653
SRR8316908Gold flowering stage 50.586
SRP132670SRR6706286Control45.405
SRR6706287Light intensity 50%42.043
SRR6706288Light intensity 20%37.741
CNP0000432CNS0095592Slightly white alabastrum(diploid) 132.532
CNS0095593Slightly white alabastrum(diploid) 226.874
CNS0095594Slightly white alabastrum(diploid) 330.765
CNS0095595Whole white alabastrum(diploid) 232.582
CNS0095596Whole white alabastrum(diploid) 332.526
CNS0095597Whole white alabastrum(diploid) 443.780
CNS0095598Silvery flower (diploied) 135.007
CNS0095599Silvery flower (diploied) 229.613
CNS0095600Silvery flower (diploied) 340.888
CNS0095601Golden flower (diploid) 134.261
CNS0095602Golden flower (diploid) 238.482
CNS0095603Golden flower (diploid) 335.100
CNS0095604Slightly white alabastrum(tetraploid) 132.949
CNS0095605Slightly white alabastrum(tetraploid) 230.671
CNS0095606Slightly white alabastrum(tetraploid) 324.617
CNS0095607Whole white alabastrum(tetraploid) 139.778
CNS0095608Whole white alabastrum(tetraploid) 245.730
CNS0095609Whole white alabastrum(tetraploid) 327.874
CNS0095610Silvery flower (tetraploid) 141.213
CNS0095611Silvery flower (tetraploid) 241.368
CNS0095612Silvery flower (tetraploid) 345.842
CNS0095613Golden flower (tetraploid) 142.273
CNS0095614Golden flower (tetraploid) 244.562
CNS0095615Golden flower (tetraploid) 345.319
CRA001975CRR073297Stem 132.779
CRR073298Stem 225.794
CRR073299Stem 325.604
CRR073300Leaf 137.384
CRR073301Leaf 234.809
CRR073302Leaf 326.250
CRR073303Juvenile bud 128.387
CRR073304Juvenile bud 232.952
CRR073305Juvenile bud 340.607
CRR073306Third green 123.160
CRR073307Third green 219.719
CRR073308Third green 316.594
CRR073309Second white 116.714
CRR073310Second white 229.961
CRR073311Second white 320.784
CRR073312Silver flowering 123.348
CRR073313Silver flowering 223.042
CRR073314Silver flowering 321.101
CRR073315Gold flowering 114.582
CRR073316Gold flowering 226.533
CRR073317Gold flowering 311.920
CRR073318Tawny withering 129.629
CRR073319Tawny withering 238.853
CRR073320Tawny withering 334.104