Gene detail

Detail information of GWHGAAZE032008

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP43807.1	6.9837E-173	hypothetical protein JCGZ_23015 [Jatropha curcas]
COG	NP_389459.1	1E-33	serine/threonine protein kinase
Swissprot	tr\|Q94CG0\|CIPKL_ARATH	2E-129	CBL-interacting serine/threonine-protein kinase 21
trEMBL	tr\|A0A067L5Y2\|A0A067L5Y2_JATCU	3E-173	Uncharacterized protein {ECO:0000313\|EMBL:KDP43807.1}
TAIR10	AT5G57630.1	9E-107	CBL-interacting protein kinase 21

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	68895402	68900513	-
GWHAAZE00000009	mRNA	68895402	68900513	-
GWHAAZE00000009	exon	68900130	68900513	-
GWHAAZE00000009	exon	68899954	68900016	-
GWHAAZE00000009	exon	68899796	68899867	-
GWHAAZE00000009	exon	68899601	68899708	-
GWHAAZE00000009	exon	68899437	68899508	-
GWHAAZE00000009	exon	68899073	68899126	-
GWHAAZE00000009	exon	68898570	68898695	-
GWHAAZE00000009	exon	68898391	68898480	-
GWHAAZE00000009	exon	68898185	68898310	-
GWHAAZE00000009	exon	68897324	68897443	-
GWHAAZE00000009	exon	68895538	68895647	-
GWHAAZE00000009	exon	68895402	68895456	-
GWHAAZE00000009	CDS	68900130	68900513	-
GWHAAZE00000009	CDS	68899954	68900016	-
GWHAAZE00000009	CDS	68899796	68899867	-
GWHAAZE00000009	CDS	68899601	68899708	-
GWHAAZE00000009	CDS	68899437	68899508	-
GWHAAZE00000009	CDS	68899073	68899126	-
GWHAAZE00000009	CDS	68898570	68898695	-
GWHAAZE00000009	CDS	68898391	68898480	-
GWHAAZE00000009	CDS	68898185	68898310	-
GWHAAZE00000009	CDS	68897324	68897443	-
GWHAAZE00000009	CDS	68895538	68895647	-
GWHAAZE00000009	CDS	68895402	68895456	-

Transcript Sequence
>GWHTAAZE032046 ATGGAGGTTGGATCATTACAGGGGCATGAAAATTCTATGAACACAAATCAAGTCGCTTGCAACTTCTGTTCAGAGTTTGGGCAGAGTGGATATAAGGAACATCTGCAAGGTGTTCAGAAATCAGAACAAGAAAACGAGTGTTTTGTTGCCGGGGAAAATTCAGGAGAGACAGAGAGACATTCTCTCTTCCAAGAACACGTGTTTGGTTACCGAGAAAATCCAGAAGGGAAAAAACATTTCTCCCGAAGAATGGGGTTTGCAAACAGTGTTGGAAAGTACCAGCTTGGTCGAACGATTGGTGAAGGTACTTTTGCAAAAGTGAAGTTGGCTATTAACACTGTCAATGCGCAGCAAGTGGCAATCAAGATCATTGATAAACAGATGGTACAGAGAGAAATCAGGACAATGAAACTATTGCAACACCCCAACATTGTTCGTATACACGAGGTAATTGGGTCAAAGACAAAGATTTACATCGTGATGGAGTATGTATCGGGAGGGCAACTCTCAGACAAGATGTCTTATATTCAGAGGTTAAGTGAAAGCGAGGCAAGGAAGAACTTTCAGCAGCTCATAGATGCAGTGGATTATTGCCATTGCAGAGGAGTATATCATAGAGATCTGAAGCCACAGAATTTGCTTTTGGATAGCAAGGGAAATTTGAAAATGTCTGATTTTGGACTAAGTACATTAAGAAAGCCAGGGAATCTGATATCGACAGCATGTGGTTCTCCAAGCTATGTAGCACCCGAGTTGCTTACATGTAGAGCCTATGACGGAGCTGCAGCCGATGTCTGGTCGTGTGGAGTTATCCTTTATGAATTACTTACTGGTTACCTACCATTTGATGACAATAACCTGATTAACTTGTATAGAAAGATATCAAGAGCCGAGTATGTATTTCCTATATGGATTACAGAGAGCCAAAAGAAGCTAATCAGGAGGATATTTGATATAAATCCAAGAAAGCGTATAACTATACCAGAGATATTTGAGGACCAGTGGTTTCAAATTAATTATGAGCCTGCTGTTCGAATTGAATCTGATGAAAGTATCAACTTGGACGATGTTCATGCTGCTTTCAGTTCATTTAAGGACAATGAAAAGCAAAAGCTAAAGATTGGGTCTAAGCATACAGTCAACAAAACCATTGAGAAAATTGAGGCAGCAGCAAAGGACGCAAGTCTACTAGTTGAAAGGAGGAACAACTCCAAGTTCTGTAAAAGTTTATCAAGTATGCTGACTGAAGAGTCCGGATCGTCATCCGAGATAGATGAACCTGATGAAGCCAGTATTTACAGCAAAAACATCAAAGAATCTAAAAGCTGTGAGACAAAAGATACAGACAAGAAGGACCACCGTGGGTATTCTTCCCCTTGA

Network for GWHGAAZE032008

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	93	336	9.00E-69

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CAMKL-CHK1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.128
	SRR3591706	second leaf	0.981
	SRR3591707	mature leaf	0.360
	SRR3591708	Shoot apex	0.311
	SRR3591709	Stem	3.261
	SRR3591710	White floral bud	4.485
	SRR3591711	White flower	0.463
	SRR3591712	Green floral bud	6.444
	SRR3591713	Yellow flower	0.384
SRP173429	SRR8316895	Juvenile bud stage	1.395
	SRR8316896	Juvenile bud stage	2.762
	SRR8316897	Juvenile bud stage	0.793
	SRR8316894	Third green stage	1.189
	SRR8316900	Third green stage	2.454
	SRR8316901	Third green stage	2.721
	SRR8316898	Complete white stage	0.168
	SRR8316899	Complete white stage	1.229
	SRR8316903	Complete white stage	1.164
	SRR8316902	Silver flowering stage	0.289
	SRR8316904	Silver flowering stage	1.198
	SRR8316905	Silver flowering stage	0.125
	SRR8316906	Gold flowering stage	0.503
	SRR8316907	Gold flowering stage	0.460
	SRR8316908	Gold flowering stage	0.388
SRP132670	SRR6706286	Control	0.928
	SRR6706287	Light intensity 50%	1.165
	SRR6706288	Light intensity 20%	1.116
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.137
	CNS0095593	Slightly white alabastrum(diploid) 2	4.112
	CNS0095594	Slightly white alabastrum(diploid) 3	5.874
	CNS0095595	Whole white alabastrum(diploid) 2	5.361
	CNS0095596	Whole white alabastrum(diploid) 3	5.080
	CNS0095597	Whole white alabastrum(diploid) 4	5.276
	CNS0095598	Silvery flower (diploied) 1	3.506
	CNS0095599	Silvery flower (diploied) 2	3.118
	CNS0095600	Silvery flower (diploied) 3	1.179
	CNS0095601	Golden flower (diploid) 1	2.030
	CNS0095602	Golden flower (diploid) 2	1.053
	CNS0095603	Golden flower (diploid) 3	1.494
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.730
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.949
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.749
	CNS0095607	Whole white alabastrum(tetraploid) 1	4.784
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.855
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.754
	CNS0095610	Silvery flower (tetraploid) 1	3.000
	CNS0095611	Silvery flower (tetraploid) 2	2.858
	CNS0095612	Silvery flower (tetraploid) 3	2.091
	CNS0095613	Golden flower (tetraploid) 1	2.229
	CNS0095614	Golden flower (tetraploid) 2	3.258
	CNS0095615	Golden flower (tetraploid) 3	1.756
CRA001975	CRR073297	Stem 1	1.136
	CRR073298	Stem 2	1.324
	CRR073299	Stem 3	0.553
	CRR073300	Leaf 1	1.103
	CRR073301	Leaf 2	1.185
	CRR073302	Leaf 3	0.133
	CRR073303	Juvenile bud 1	1.020
	CRR073304	Juvenile bud 2	0.901
	CRR073305	Juvenile bud 3	0.117
	CRR073306	Third green 1	0.340
	CRR073307	Third green 2	0.649
	CRR073308	Third green 3	0.298
	CRR073309	Second white 1	0.163
	CRR073310	Second white 2	0.051
	CRR073311	Second white 3	0.059
	CRR073312	Silver flowering 1	0.227
	CRR073313	Silver flowering 2	0.485
	CRR073314	Silver flowering 3	0.002
	CRR073315	Gold flowering 1	0.374
	CRR073316	Gold flowering 2	0.191
	CRR073317	Gold flowering 3	0.118
	CRR073318	Tawny withering 1	1.069
	CRR073319	Tawny withering 2	0.777
	CRR073320	Tawny withering 3	0.281