Detail information of GWHGAAZE031980


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010659832.14.6955E-81PREDICTED: nuclear transcription factor Y subunit C-9-like isoform X3 [Vitis vinifera]
Swissprottr|Q8L4B2|NFYC9_ARATH2E-60Nuclear transcription factor Y subunit C-9
trEMBLtr|F6HYY4|F6HYY4_VITVI2E-81Putative uncharacterized protein {ECO:0000313|EMBL:CCB59898.1}
TAIR10AT1G08970.42E-48nuclear factor Y, subunit C9

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6843394368434410+
GWHAAZE00000009mRNA6843394368434410+
GWHAAZE00000009exon6843394368434410+
GWHAAZE00000009CDS6843394368434410+
Transcript Sequence

Network for GWHGAAZE031980

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00808.24CBFD_NFYB_HMF1542.50E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YC

KEGG pathway

KO Enzyme pathway mapID
K08066NFYC, HAP5 Antigen processing and presentation map04612

Gene Ontology

GO term OntologyName
GO:0046982molecular_functionprotein heterodimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.300
SRR3591706second leaf22.725
SRR3591707mature leaf43.100
SRR3591708Shoot apex36.936
SRR3591709Stem78.321
SRR3591710White floral bud145.294
SRR3591711White flower148.030
SRR3591712Green floral bud96.648
SRR3591713Yellow flower129.701
SRP173429 SRR8316895Juvenile bud stage 57.596
SRR8316896Juvenile bud stage 104.336
SRR8316897Juvenile bud stage 40.607
SRR8316894Third green stage 33.592
SRR8316900Third green stage 104.022
SRR8316901Third green stage 119.264
SRR8316898Complete white stage 81.176
SRR8316899Complete white stage 140.317
SRR8316903Complete white stage 119.373
SRR8316902Silver flowering stage87.833
SRR8316904Silver flowering stage101.894
SRR8316905Silver flowering stage53.837
SRR8316906Gold flowering stage 165.541
SRR8316907Gold flowering stage 212.213
SRR8316908Gold flowering stage 193.406
SRP132670SRR6706286Control85.044
SRR6706287Light intensity 50%86.800
SRR6706288Light intensity 20%87.800
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1122.600
CNS0095593Slightly white alabastrum(diploid) 2105.434
CNS0095594Slightly white alabastrum(diploid) 3133.475
CNS0095595Whole white alabastrum(diploid) 2112.047
CNS0095596Whole white alabastrum(diploid) 3120.974
CNS0095597Whole white alabastrum(diploid) 4106.851
CNS0095598Silvery flower (diploied) 1126.570
CNS0095599Silvery flower (diploied) 2131.595
CNS0095600Silvery flower (diploied) 3164.360
CNS0095601Golden flower (diploid) 1136.120
CNS0095602Golden flower (diploid) 2135.452
CNS0095603Golden flower (diploid) 3131.703
CNS0095604Slightly white alabastrum(tetraploid) 1128.120
CNS0095605Slightly white alabastrum(tetraploid) 2125.921
CNS0095606Slightly white alabastrum(tetraploid) 390.482
CNS0095607Whole white alabastrum(tetraploid) 1135.134
CNS0095608Whole white alabastrum(tetraploid) 2132.183
CNS0095609Whole white alabastrum(tetraploid) 3121.215
CNS0095610Silvery flower (tetraploid) 1186.089
CNS0095611Silvery flower (tetraploid) 2178.543
CNS0095612Silvery flower (tetraploid) 3289.772
CNS0095613Golden flower (tetraploid) 1173.332
CNS0095614Golden flower (tetraploid) 2178.217
CNS0095615Golden flower (tetraploid) 3170.002
CRA001975CRR073297Stem 174.538
CRR073298Stem 264.074
CRR073299Stem 367.049
CRR073300Leaf 177.929
CRR073301Leaf 279.727
CRR073302Leaf 357.845
CRR073303Juvenile bud 171.330
CRR073304Juvenile bud 260.912
CRR073305Juvenile bud 370.689
CRR073306Third green 1114.382
CRR073307Third green 298.498
CRR073308Third green 3105.514
CRR073309Second white 1136.638
CRR073310Second white 2120.432
CRR073311Second white 3112.800
CRR073312Silver flowering 198.798
CRR073313Silver flowering 291.600
CRR073314Silver flowering 368.405
CRR073315Gold flowering 122.591
CRR073316Gold flowering 236.913
CRR073317Gold flowering 335.439
CRR073318Tawny withering 180.571
CRR073319Tawny withering 265.334
CRR073320Tawny withering 364.564