Detail information of GWHGAAZE031924


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010661263.10PREDICTED: translation initiation factor eIF-2B subunit epsilon [Vitis vinifera]
COGYP_004167999.12E-12nucleotidyl transferase
trEMBLtr|D7U5T4|D7U5T4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI38103.3}
TAIR10AT2G34970.14E-169Trimeric LpxA-like enzyme

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6743534567445919-
GWHAAZE00000009mRNA6743534567445919-
GWHAAZE00000009exon6743534567435473-
GWHAAZE00000009exon6743577467436036-
GWHAAZE00000009exon6743802567438214-
GWHAAZE00000009exon6744341467443521-
GWHAAZE00000009exon6744444167444781-
GWHAAZE00000009exon6744550267445919-
GWHAAZE00000009CDS6744550267445919-
GWHAAZE00000009CDS6744444167444781-
GWHAAZE00000009CDS6744341467443521-
GWHAAZE00000009CDS6743802567438214-
GWHAAZE00000009CDS6743577467436036-
GWHAAZE00000009CDS6743534567435473-
Transcript Sequence

Network for GWHGAAZE031924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00132.25Hexapep3663981.30E-05
PF00132.25Hexapep4054370.0032
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03240EIF2B5 RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.677
SRR3591706second leaf15.121
SRR3591707mature leaf10.574
SRR3591708Shoot apex26.001
SRR3591709Stem17.083
SRR3591710White floral bud17.531
SRR3591711White flower21.422
SRR3591712Green floral bud15.884
SRR3591713Yellow flower18.553
SRP173429 SRR8316895Juvenile bud stage 12.542
SRR8316896Juvenile bud stage 17.555
SRR8316897Juvenile bud stage 9.915
SRR8316894Third green stage 6.984
SRR8316900Third green stage 17.855
SRR8316901Third green stage 13.110
SRR8316898Complete white stage 5.029
SRR8316899Complete white stage 18.617
SRR8316903Complete white stage 9.008
SRR8316902Silver flowering stage4.663
SRR8316904Silver flowering stage10.494
SRR8316905Silver flowering stage3.154
SRR8316906Gold flowering stage 13.568
SRR8316907Gold flowering stage 10.972
SRR8316908Gold flowering stage 16.107
SRP132670SRR6706286Control14.895
SRR6706287Light intensity 50%16.258
SRR6706288Light intensity 20%16.746
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.490
CNS0095593Slightly white alabastrum(diploid) 25.384
CNS0095594Slightly white alabastrum(diploid) 37.308
CNS0095595Whole white alabastrum(diploid) 28.475
CNS0095596Whole white alabastrum(diploid) 35.837
CNS0095597Whole white alabastrum(diploid) 47.541
CNS0095598Silvery flower (diploied) 112.797
CNS0095599Silvery flower (diploied) 211.723
CNS0095600Silvery flower (diploied) 315.735
CNS0095601Golden flower (diploid) 17.365
CNS0095602Golden flower (diploid) 216.356
CNS0095603Golden flower (diploid) 315.548
CNS0095604Slightly white alabastrum(tetraploid) 19.004
CNS0095605Slightly white alabastrum(tetraploid) 26.734
CNS0095606Slightly white alabastrum(tetraploid) 322.650
CNS0095607Whole white alabastrum(tetraploid) 16.129
CNS0095608Whole white alabastrum(tetraploid) 25.256
CNS0095609Whole white alabastrum(tetraploid) 315.223
CNS0095610Silvery flower (tetraploid) 115.761
CNS0095611Silvery flower (tetraploid) 217.462
CNS0095612Silvery flower (tetraploid) 316.733
CNS0095613Golden flower (tetraploid) 18.036
CNS0095614Golden flower (tetraploid) 214.695
CNS0095615Golden flower (tetraploid) 313.392
CRA001975CRR073297Stem 113.865
CRR073298Stem 213.554
CRR073299Stem 312.892
CRR073300Leaf 113.211
CRR073301Leaf 29.313
CRR073302Leaf 39.322
CRR073303Juvenile bud 110.124
CRR073304Juvenile bud 27.358
CRR073305Juvenile bud 39.791
CRR073306Third green 17.205
CRR073307Third green 24.961
CRR073308Third green 36.700
CRR073309Second white 18.979
CRR073310Second white 27.820
CRR073311Second white 39.523
CRR073312Silver flowering 17.999
CRR073313Silver flowering 27.561
CRR073314Silver flowering 37.553
CRR073315Gold flowering 15.342
CRR073316Gold flowering 28.988
CRR073317Gold flowering 35.456
CRR073318Tawny withering 111.333
CRR073319Tawny withering 27.036
CRR073320Tawny withering 38.119