Detail information of GWHGAAZE031734


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI28597.32.2182E-170unnamed protein product [Vitis vinifera]
Swissprottr|Q8L611|SC31B_ARATH1E-84Protein transport protein SEC31 homolog B {ECO:0000305}
trEMBLtr|F6HHX2|F6HHX2_VITVI3E-170Putative uncharacterized protein {ECO:0000313|EMBL:CCB51818.1}
TAIR10AT3G63460.12E-54transducin family protein / WD-40 repeat family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6423193964235460+
GWHAAZE00000009mRNA6423193964235460+
GWHAAZE00000009exon6423193964232124+
GWHAAZE00000009exon6423220364232416+
GWHAAZE00000009exon6423363464233774+
GWHAAZE00000009exon6423390064233970+
GWHAAZE00000009exon6423446464234637+
GWHAAZE00000009exon6423493464235059+
GWHAAZE00000009exon6423515264235460+
GWHAAZE00000009CDS6423193964232124+
GWHAAZE00000009CDS6423220364232416+
GWHAAZE00000009CDS6423363464233774+
GWHAAZE00000009CDS6423390064233970+
GWHAAZE00000009CDS6423446464234637+
GWHAAZE00000009CDS6423493464235059+
GWHAAZE00000009CDS6423515264235460+
Transcript Sequence

Network for GWHGAAZE031734

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14005SEC31 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf51.815
SRR3591706second leaf32.201
SRR3591707mature leaf25.428
SRR3591708Shoot apex48.740
SRR3591709Stem45.208
SRR3591710White floral bud32.160
SRR3591711White flower34.561
SRR3591712Green floral bud55.581
SRR3591713Yellow flower33.134
SRP173429 SRR8316895Juvenile bud stage 29.404
SRR8316896Juvenile bud stage 45.817
SRR8316897Juvenile bud stage 22.012
SRR8316894Third green stage 18.232
SRR8316900Third green stage 43.500
SRR8316901Third green stage 47.538
SRR8316898Complete white stage 10.875
SRR8316899Complete white stage 39.971
SRR8316903Complete white stage 18.158
SRR8316902Silver flowering stage7.304
SRR8316904Silver flowering stage10.318
SRR8316905Silver flowering stage4.977
SRR8316906Gold flowering stage 18.737
SRR8316907Gold flowering stage 20.896
SRR8316908Gold flowering stage 22.452
SRP132670SRR6706286Control41.968
SRR6706287Light intensity 50%41.168
SRR6706288Light intensity 20%42.063
CNP0000432CNS0095592Slightly white alabastrum(diploid) 130.694
CNS0095593Slightly white alabastrum(diploid) 228.293
CNS0095594Slightly white alabastrum(diploid) 329.283
CNS0095595Whole white alabastrum(diploid) 225.198
CNS0095596Whole white alabastrum(diploid) 325.045
CNS0095597Whole white alabastrum(diploid) 426.233
CNS0095598Silvery flower (diploied) 123.165
CNS0095599Silvery flower (diploied) 225.664
CNS0095600Silvery flower (diploied) 335.476
CNS0095601Golden flower (diploid) 123.169
CNS0095602Golden flower (diploid) 237.107
CNS0095603Golden flower (diploid) 332.118
CNS0095604Slightly white alabastrum(tetraploid) 142.856
CNS0095605Slightly white alabastrum(tetraploid) 235.748
CNS0095606Slightly white alabastrum(tetraploid) 362.982
CNS0095607Whole white alabastrum(tetraploid) 128.388
CNS0095608Whole white alabastrum(tetraploid) 222.275
CNS0095609Whole white alabastrum(tetraploid) 350.748
CNS0095610Silvery flower (tetraploid) 129.600
CNS0095611Silvery flower (tetraploid) 235.465
CNS0095612Silvery flower (tetraploid) 324.088
CNS0095613Golden flower (tetraploid) 116.226
CNS0095614Golden flower (tetraploid) 230.195
CNS0095615Golden flower (tetraploid) 323.548
CRA001975CRR073297Stem 152.336
CRR073298Stem 250.596
CRR073299Stem 345.016
CRR073300Leaf 158.710
CRR073301Leaf 253.667
CRR073302Leaf 339.311
CRR073303Juvenile bud 148.588
CRR073304Juvenile bud 235.509
CRR073305Juvenile bud 374.979
CRR073306Third green 16.979
CRR073307Third green 26.470
CRR073308Third green 38.379
CRR073309Second white 19.798
CRR073310Second white 29.406
CRR073311Second white 311.415
CRR073312Silver flowering 113.588
CRR073313Silver flowering 216.974
CRR073314Silver flowering 314.207
CRR073315Gold flowering 114.407
CRR073316Gold flowering 224.997
CRR073317Gold flowering 320.021
CRR073318Tawny withering 137.916
CRR073319Tawny withering 231.627
CRR073320Tawny withering 342.966