Gene detail

Detail information of GWHGAAZE031681

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006446100.1	0	hypothetical protein CICLE_v10017600mg [Citrus clementina]
Swissprot	tr\|O22342\|ADT1_GOSHI	0	ADP,ATP carrier protein 1, mitochondrial (Precursor)
trEMBL	tr\|V4U5H3\|V4U5H3_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR59340.1}
TAIR10	AT5G13490.2	6E-161	ADP/ATP carrier 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	63115453	63118782	+
GWHAAZE00000009	mRNA	63115453	63118782	+
GWHAAZE00000009	exon	63115453	63115932	+
GWHAAZE00000009	exon	63117242	63117613	+
GWHAAZE00000009	exon	63118486	63118782	+
GWHAAZE00000009	CDS	63115453	63115932	+
GWHAAZE00000009	CDS	63117242	63117613	+
GWHAAZE00000009	CDS	63118486	63118782	+

Transcript Sequence
>GWHTAAZE031719 ATGATGATTGATCAAACACAACACCCCACCGTAGCTCAGAAGGTAGGCAGCAACCTCCTCCTAAAATCTTGCCCGACAGAAGATACGCGTTCTTATGATAATGGCTTCCAAAGGCAAATCAAATACAGGAACTACTCAAGTGCAGCATTTCAGTATCCCACCATTTTGCACTCTTGTCGAGCCAAAAATGATCTTTCATTTGTTCAATCAAATTTATCATCATCGCCTGTTTTTGTCCAAGCACCAGCTGAGAAGGGCATTGCGGGGTTTGCCATTGATTTTCTTATGGGGGGAGTTTCTGCAGCCGTATCCAAAACGGCCGCAGCTCCCATTGAAAGGGTGAAGCTTCTGATTCAGAACCAGGACGAGATGATCAAGGCTGGTAGGCTATCTGAACCATACAAGGGGATTGGTGATTGTTTCAGCCGAACGATTAAGGATGAAGGCTTCGGTTCTTTATGGAGAGGAAACACTGCTAATGCTTTGAACTTTGCGTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAAAGATGGTTACTGGAAATGGTTCGCTGGGAACCTGGCTTCCGGTGGTATGGCCGGTGCTTCTTCCCTTCTTTTCGTCTATTCCCTCGACTATGCTAGAACCCGTTTGGCTAATGATGCAAAGGCTGCAAAGAAGGGGGGAGAGAGGCAATTTAATGGCTTGATTGATGTCTATAAGAAAACAATGGCAACCGATGGCATTGCCGGGCTTTACCGTGGATTCAACATTTCTTGTGTTGGGATCATTGTCTATCGCGGTCTCTACTTTGGAATGTACGATTCCTTGAAGCCGGTAATCCTTACCGGAAAGCTGCAGGATAGTTTCTTTGCTAGCTTCGCTCTCGGTTGGGTAATCACCAACGGGGCCGGGCTTGCATCGTACCCAATTGACACGGTCCGCAGAAGAATGATGATGACCTCGGGTGAAGCTGTGAAGTACAAGAGCTCAATGGAGGCATTTAGCGTCATCCTTAAGAACGAGGGAGCCAAGTCCCTCTTCAAGGGTGCCGGTGCCAACATCCTCCGTGCCGTTGCCGGTGCTGGTGTTCTCGCCGGTTATGATAAGCTCCAAATGATTGTGTTCGGAAAGAAGTACGGATCTGGTGGTGCTTAA

Network for GWHGAAZE031681

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.28	Mito_carr	90	175	1.70E-14
PF00153.28	Mito_carr	184	279	1.30E-23
PF00153.28	Mito_carr	286	371	6.10E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05863	SLC25A4S, ANT	Calcium signaling pathway	map04020
		cGMP-PKG signaling pathway	map04022
		Necroptosis	map04217
		Cellular senescence	map04218

Gene Ontology

GO term	Ontology	Name
GO:0055085	biological_process	transmembrane transport
GO:0005743	cellular_component	mitochondrial inner membrane
GO:0022857	molecular_function	transmembrane transporter activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	15.039
	SRR3591706	second leaf	3.588
	SRR3591707	mature leaf	27.982
	SRR3591708	Shoot apex	1.826
	SRR3591709	Stem	38.406
	SRR3591710	White floral bud	142.091
	SRR3591711	White flower	7.546
	SRR3591712	Green floral bud	685.441
	SRR3591713	Yellow flower	2.551
SRP173429	SRR8316895	Juvenile bud stage	19.529
	SRR8316896	Juvenile bud stage	161.856
	SRR8316897	Juvenile bud stage	82.082
	SRR8316894	Third green stage	95.669
	SRR8316900	Third green stage	450.490
	SRR8316901	Third green stage	445.095
	SRR8316898	Complete white stage	0.281
	SRR8316899	Complete white stage	3.168
	SRR8316903	Complete white stage	0.926
	SRR8316902	Silver flowering stage	0.992
	SRR8316904	Silver flowering stage	2.172
	SRR8316905	Silver flowering stage	1.290
	SRR8316906	Gold flowering stage	0.873
	SRR8316907	Gold flowering stage	0.316
	SRR8316908	Gold flowering stage	0.603
SRP132670	SRR6706286	Control	198.345
	SRR6706287	Light intensity 50%	206.908
	SRR6706288	Light intensity 20%	188.994
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	386.013
	CNS0095593	Slightly white alabastrum(diploid) 2	316.892
	CNS0095594	Slightly white alabastrum(diploid) 3	459.116
	CNS0095595	Whole white alabastrum(diploid) 2	787.424
	CNS0095596	Whole white alabastrum(diploid) 3	950.154
	CNS0095597	Whole white alabastrum(diploid) 4	1023.192
	CNS0095598	Silvery flower (diploied) 1	3.893
	CNS0095599	Silvery flower (diploied) 2	14.615
	CNS0095600	Silvery flower (diploied) 3	3.776
	CNS0095601	Golden flower (diploid) 1	5.556
	CNS0095602	Golden flower (diploid) 2	2.666
	CNS0095603	Golden flower (diploid) 3	2.801
	CNS0095604	Slightly white alabastrum(tetraploid) 1	445.610
	CNS0095605	Slightly white alabastrum(tetraploid) 2	476.325
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.294
	CNS0095607	Whole white alabastrum(tetraploid) 1	920.216
	CNS0095608	Whole white alabastrum(tetraploid) 2	1025.677
	CNS0095609	Whole white alabastrum(tetraploid) 3	458.539
	CNS0095610	Silvery flower (tetraploid) 1	3.650
	CNS0095611	Silvery flower (tetraploid) 2	5.735
	CNS0095612	Silvery flower (tetraploid) 3	16.971
	CNS0095613	Golden flower (tetraploid) 1	2.536
	CNS0095614	Golden flower (tetraploid) 2	1.818
	CNS0095615	Golden flower (tetraploid) 3	9.346
CRA001975	CRR073297	Stem 1	78.803
	CRR073298	Stem 2	110.925
	CRR073299	Stem 3	49.369
	CRR073300	Leaf 1	387.524
	CRR073301	Leaf 2	283.251
	CRR073302	Leaf 3	171.539
	CRR073303	Juvenile bud 1	237.747
	CRR073304	Juvenile bud 2	199.501
	CRR073305	Juvenile bud 3	14.618
	CRR073306	Third green 1	117.059
	CRR073307	Third green 2	188.403
	CRR073308	Third green 3	120.140
	CRR073309	Second white 1	9.981
	CRR073310	Second white 2	16.334
	CRR073311	Second white 3	21.023
	CRR073312	Silver flowering 1	104.714
	CRR073313	Silver flowering 2	109.718
	CRR073314	Silver flowering 3	62.789
	CRR073315	Gold flowering 1	120.235
	CRR073316	Gold flowering 2	29.429
	CRR073317	Gold flowering 3	96.687
	CRR073318	Tawny withering 1	129.438
	CRR073319	Tawny withering 2	169.294
	CRR073320	Tawny withering 3	121.594