Gene detail

Detail information of GWHGAAZE031572

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDP02334.1	6.3832E-118	unnamed protein product [Coffea canephora]
COG	YP_001958461.1	5E-29	hypothetical protein Aasi_1443
Swissprot	tr\|Q9SR05\|ANX1_ARATH	6E-107	Receptor-like protein kinase ANXUR1 (Precursor)
trEMBL	tr\|A0A068U2D1\|A0A068U2D1_COFCA	2E-118	Coffea canephora DH200=94 genomic scaffold, scaffold_8 {ECO:0000313\|EMBL:CDP02334.1}
TAIR10	AT3G51550.1	5E-78	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	61107110	61108357	+
GWHAAZE00000009	mRNA	61107110	61108357	+
GWHAAZE00000009	exon	61107110	61107581	+
GWHAAZE00000009	exon	61107612	61108357	+
GWHAAZE00000009	CDS	61107110	61107581	+
GWHAAZE00000009	CDS	61107612	61108357	+

Transcript Sequence
>GWHTAAZE031608 ATGTTGAGCAGGAAAGCCATCAAGATAACCCGCAAAATTGTTGAGCTCTTGTCTGAGGGACATTTTGATAGAATCACTGACACTCTGCCAACGTCTAGTAGAGAACATCTACCTCCAATCACGGTGGACACTCCCTGTGTCGAGGATCAACTATGTCGTCGCTTTAAATTTGCTGAGATTCAATCTGCCACCCAAAACTTTAAACAGGTGTTTGTCATTGGGAAGGGAGGATTTGGAAAAGTTTACAAAGGGTTGGTCGATGATGGAGCAACTGCGGTTGCTATAAAGAGATTGGATCCCACGTCCAAACAAGGAGGCAACGAGTTTCGCACAGAAATTGAGATGCTTTCTAAGTTTCGACATTGCAATCTCGTGTCTCTCATTGGCTACTGCAACGATAGTCGTGAGATGATTCTCGTTTATGAATATATGCCCAACGGAAGCCTGGCCAATCATTTGTACCCAAAAGATGCTTGGGTACAACGTCTTAAGATATGCATAGGGGCAGCTCGTGGAATTGACTATCTTCATACTGGTACGGGTATTCTACAAAGGGTCATACATCGGGATGTGAAAAGCTCAAACATTCTGTTGGATGAAAATTGGGCAGCTAAAGTTTCTGACTTTGGGTTATGCAAACTAGGTCCGGCAAATCAGTCGTGCACCCATATCAGCACCTGTGTTAGAGGAACCCCTGGCTATTGTGATCCAGAGTATTTCTTGACCCATAGGTTGACGAAGAAAGCTGACGTCTATGCCTTCGGGGTGGTACTGTTTGAAGTAATATCCGGAAAGCCGGCACTTGATTTTAGACTTCCTAAAGAGCAAAGGAGTCTAGCTGCTCGGGCCCAACAATGTGTCCGAGAAAATACCATACATCACCTTATCGATCCCAATTTGAAGTGGGAAATCTGTTCGAATTCTTTGAAGGCGTTTGTGGAAACTGCAAATCAGTGCTTACACAATGATTCAAAGAAACGGCCTAAAATGGCTGAGGTTGTGGCATCACTTGAGTTGGCATTGGCATTGCAAACTCGCAAGGATTCTACTCTACTCGATGAGGGTATCTTTGATTTTGGTGGGACTTATGATATCGATGACCAAGGCCTTCAGGTATTCCATTCACTTCATTGTATACGCTTTCTAAAGAAAAAAAAGTACTCTTTTTTGTCGAACTATGAGTTTAGAGTGATATTAGTATTACTAAGGACTTTATGA

Network for GWHGAAZE031572

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	69	335	1.90E-48

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.825
	SRR3591706	second leaf	1.187
	SRR3591707	mature leaf	0.821
	SRR3591708	Shoot apex	0.916
	SRR3591709	Stem	1.543
	SRR3591710	White floral bud	1.941
	SRR3591711	White flower	0.759
	SRR3591712	Green floral bud	4.824
	SRR3591713	Yellow flower	0.287
SRP173429	SRR8316895	Juvenile bud stage	0.271
	SRR8316896	Juvenile bud stage	0.102
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.157
	SRR8316901	Third green stage	0.044
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.219
	SRR8316903	Complete white stage	0.171
	SRR8316902	Silver flowering stage	0.060
	SRR8316904	Silver flowering stage	0.154
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.066
	SRR8316907	Gold flowering stage	0.115
	SRR8316908	Gold flowering stage	0.005
SRP132670	SRR6706286	Control	0.223
	SRR6706287	Light intensity 50%	0.105
	SRR6706288	Light intensity 20%	0.220
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.231
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.076
	CNS0095597	Whole white alabastrum(diploid) 4	0.011
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.248
	CNS0095600	Silvery flower (diploied) 3	0.185
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.057
	CNS0095603	Golden flower (diploid) 3	0.179
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.123
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.011
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.152
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.119
	CNS0095610	Silvery flower (tetraploid) 1	0.277
	CNS0095611	Silvery flower (tetraploid) 2	0.165
	CNS0095612	Silvery flower (tetraploid) 3	0.421
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.579
	CNS0095615	Golden flower (tetraploid) 3	0.151
CRA001975	CRR073297	Stem 1	0.285
	CRR073298	Stem 2	0.161
	CRR073299	Stem 3	0.041
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.005
	CRR073302	Leaf 3	0.256
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.027
	CRR073306	Third green 1	0.238
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.161
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.008
	CRR073313	Silver flowering 2	0.034
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.220
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.002
	CRR073319	Tawny withering 2	0.249
	CRR073320	Tawny withering 3	0.000