Gene detail

Detail information of GWHGAAZE031557

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_003626619.1	1.5914E-125	Soluble inorganic pyrophosphatase [Medicago truncatula]
COG	YP_679690.1	9E-61	inorganic pyrophosphatase
Swissprot	tr\|Q43187\|IPYR_SOLTU	2E-124	Soluble inorganic pyrophosphatase
trEMBL	tr\|Q2HTA8\|Q2HTA8_MEDTR	6E-126	Soluble inorganic pyrophosphatase {ECO:0000313\|EMBL:AES82837.1}
TAIR10	AT1G01050.1	1E-98	pyrophosphorylase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	60927534	60929133	+
GWHAAZE00000009	mRNA	60927534	60929133	+
GWHAAZE00000009	exon	60927534	60927645	+
GWHAAZE00000009	exon	60927841	60927869	+
GWHAAZE00000009	exon	60927957	60928022	+
GWHAAZE00000009	exon	60928133	60928222	+
GWHAAZE00000009	exon	60928359	60928424	+
GWHAAZE00000009	exon	60928561	60928681	+
GWHAAZE00000009	exon	60928882	60928963	+
GWHAAZE00000009	exon	60929091	60929133	+
GWHAAZE00000009	CDS	60927534	60927645	+
GWHAAZE00000009	CDS	60927841	60927869	+
GWHAAZE00000009	CDS	60927957	60928022	+
GWHAAZE00000009	CDS	60928133	60928222	+
GWHAAZE00000009	CDS	60928359	60928424	+
GWHAAZE00000009	CDS	60928561	60928681	+
GWHAAZE00000009	CDS	60928882	60928963	+
GWHAAZE00000009	CDS	60929091	60929133	+

Transcript Sequence
>GWHTAAZE031593 ATGAGTGACGAAGAAGATCAACAAAGGAGAGCTCCAAAGCTGAATGAGAGGATCCTATCATCCTTGTCTAAGAGATCTGTCGCTGCACATGCCTGGCACGATCTTGAGCTTGGCCCAGAAGCACCACATATTTTCAACTGCGTTGTTGAGATTACCAAAGGAAGCAAGGTGAAATATGAACTTGACAAGAAGACAGGAATGATTAAGGTCGATCGCGTCTTATATTCATCAGTGGTGTATCCACACAACTATGGTTTCATTCCTCGCACTCTATGTGAAGACAATGACCCAATGGATGAACCAGTGCTTCCAGGTTGTTTTTTGAGGGCCAGGCCTATTGGTCTAATGCCCATGATTGATCAGGGAGAGAAAGATGATAAGATCATAGCAGTGTGTGCTGATGATCCAGAGTACAAACACTTCACCGACTTCAAACAGCTTTCCCCTCATCGCGTTCATGAGATCCGACGTTTCTTTGAAGACTACAAGAAGAATGAAAACAAAGAGGTAGCTGTGAATGACTTCTTATCTCCAGAGAATGCTGTTGATGCTATTCAGTACTCGATGGACCTTTATGCAGAATACCTTCTGCACACTTTGAGCCGTTAA

Network for GWHGAAZE031557

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00719.20	Pyrophosphatase	47	192	3.90E-47

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01507	ppa	Oxidative phosphorylation	map00190

Gene Ontology

GO term	Ontology	Name
GO:0006796	biological_process	phosphate-containing compound metabolic process
GO:0005737	cellular_component	cytoplasm
GO:0000287	molecular_function	magnesium ion binding
GO:0004427	molecular_function	inorganic diphosphatase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	4.901
	SRR3591706	second leaf	0.770
	SRR3591707	mature leaf	0.788
	SRR3591708	Shoot apex	2.922
	SRR3591709	Stem	5.600
	SRR3591710	White floral bud	134.987
	SRR3591711	White flower	4.541
	SRR3591712	Green floral bud	745.175
	SRR3591713	Yellow flower	2.498
SRP173429	SRR8316895	Juvenile bud stage	116.250
	SRR8316896	Juvenile bud stage	380.530
	SRR8316897	Juvenile bud stage	189.499
	SRR8316894	Third green stage	138.853
	SRR8316900	Third green stage	563.986
	SRR8316901	Third green stage	545.951
	SRR8316898	Complete white stage	3.092
	SRR8316899	Complete white stage	8.542
	SRR8316903	Complete white stage	2.389
	SRR8316902	Silver flowering stage	1.254
	SRR8316904	Silver flowering stage	2.279
	SRR8316905	Silver flowering stage	1.071
	SRR8316906	Gold flowering stage	0.751
	SRR8316907	Gold flowering stage	1.184
	SRR8316908	Gold flowering stage	1.533
SRP132670	SRR6706286	Control	187.009
	SRR6706287	Light intensity 50%	204.977
	SRR6706288	Light intensity 20%	186.671
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	304.792
	CNS0095593	Slightly white alabastrum(diploid) 2	176.447
	CNS0095594	Slightly white alabastrum(diploid) 3	329.277
	CNS0095595	Whole white alabastrum(diploid) 2	354.682
	CNS0095596	Whole white alabastrum(diploid) 3	493.684
	CNS0095597	Whole white alabastrum(diploid) 4	343.108
	CNS0095598	Silvery flower (diploied) 1	7.042
	CNS0095599	Silvery flower (diploied) 2	11.816
	CNS0095600	Silvery flower (diploied) 3	6.541
	CNS0095601	Golden flower (diploid) 1	4.925
	CNS0095602	Golden flower (diploid) 2	4.805
	CNS0095603	Golden flower (diploid) 3	5.254
	CNS0095604	Slightly white alabastrum(tetraploid) 1	578.851
	CNS0095605	Slightly white alabastrum(tetraploid) 2	578.675
	CNS0095606	Slightly white alabastrum(tetraploid) 3	10.412
	CNS0095607	Whole white alabastrum(tetraploid) 1	824.885
	CNS0095608	Whole white alabastrum(tetraploid) 2	1006.630
	CNS0095609	Whole white alabastrum(tetraploid) 3	603.785
	CNS0095610	Silvery flower (tetraploid) 1	5.782
	CNS0095611	Silvery flower (tetraploid) 2	16.454
	CNS0095612	Silvery flower (tetraploid) 3	30.802
	CNS0095613	Golden flower (tetraploid) 1	6.280
	CNS0095614	Golden flower (tetraploid) 2	4.978
	CNS0095615	Golden flower (tetraploid) 3	16.992
CRA001975	CRR073297	Stem 1	112.054
	CRR073298	Stem 2	114.406
	CRR073299	Stem 3	60.872
	CRR073300	Leaf 1	185.964
	CRR073301	Leaf 2	156.592
	CRR073302	Leaf 3	140.692
	CRR073303	Juvenile bud 1	206.186
	CRR073304	Juvenile bud 2	246.397
	CRR073305	Juvenile bud 3	11.908
	CRR073306	Third green 1	46.863
	CRR073307	Third green 2	92.394
	CRR073308	Third green 3	53.571
	CRR073309	Second white 1	8.941
	CRR073310	Second white 2	14.830
	CRR073311	Second white 3	12.541
	CRR073312	Silver flowering 1	48.561
	CRR073313	Silver flowering 2	52.175
	CRR073314	Silver flowering 3	23.467
	CRR073315	Gold flowering 1	54.581
	CRR073316	Gold flowering 2	13.108
	CRR073317	Gold flowering 3	38.725
	CRR073318	Tawny withering 1	35.921
	CRR073319	Tawny withering 2	45.366
	CRR073320	Tawny withering 3	38.083