Detail information of GWHGAAZE031457


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010326874.10PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum]
COGYP_003444757.14E-22alpha-L-glutamate ligase
Swissprottr|Q6I581|GH35_ORYSJ0Probable indole-3-acetic acid-amido synthetase GH3.5
trEMBLtr|A0A061DSK9|A0A061DSK9_THECC0Indole-3-acetic acid-amido synthetase GH3.5, putative isoform 1 {ECO:0000313|EMBL:EOX95769.1}
TAIR10AT2G46370.40Auxin-responsive GH3 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5915000759152790-
GWHAAZE00000009mRNA5915000759152790-
GWHAAZE00000009exon5915000759150545-
GWHAAZE00000009exon5915091759151740-
GWHAAZE00000009exon5915230959152410-
GWHAAZE00000009exon5915249559152790-
GWHAAZE00000009CDS5915249559152790-
GWHAAZE00000009CDS5915230959152410-
GWHAAZE00000009CDS5915091759151740-
GWHAAZE00000009CDS5915000759150545-
Transcript Sequence

Network for GWHGAAZE031457

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.14GH3175627.30E-189
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14506JAR1_4_6 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf194.825
SRR3591706second leaf47.213
SRR3591707mature leaf132.547
SRR3591708Shoot apex59.206
SRR3591709Stem91.042
SRR3591710White floral bud82.692
SRR3591711White flower84.553
SRR3591712Green floral bud102.606
SRR3591713Yellow flower56.324
SRP173429 SRR8316895Juvenile bud stage 25.532
SRR8316896Juvenile bud stage 31.966
SRR8316897Juvenile bud stage 20.196
SRR8316894Third green stage 18.314
SRR8316900Third green stage 68.113
SRR8316901Third green stage 83.468
SRR8316898Complete white stage 16.347
SRR8316899Complete white stage 113.485
SRR8316903Complete white stage 27.243
SRR8316902Silver flowering stage13.727
SRR8316904Silver flowering stage18.419
SRR8316905Silver flowering stage8.884
SRR8316906Gold flowering stage 26.067
SRR8316907Gold flowering stage 23.946
SRR8316908Gold flowering stage 27.550
SRP132670SRR6706286Control52.439
SRR6706287Light intensity 50%49.633
SRR6706288Light intensity 20%52.367
CNP0000432CNS0095592Slightly white alabastrum(diploid) 133.498
CNS0095593Slightly white alabastrum(diploid) 232.173
CNS0095594Slightly white alabastrum(diploid) 334.765
CNS0095595Whole white alabastrum(diploid) 237.866
CNS0095596Whole white alabastrum(diploid) 346.177
CNS0095597Whole white alabastrum(diploid) 449.487
CNS0095598Silvery flower (diploied) 129.911
CNS0095599Silvery flower (diploied) 229.722
CNS0095600Silvery flower (diploied) 354.299
CNS0095601Golden flower (diploid) 131.900
CNS0095602Golden flower (diploid) 251.635
CNS0095603Golden flower (diploid) 352.493
CNS0095604Slightly white alabastrum(tetraploid) 162.483
CNS0095605Slightly white alabastrum(tetraploid) 249.140
CNS0095606Slightly white alabastrum(tetraploid) 352.197
CNS0095607Whole white alabastrum(tetraploid) 161.555
CNS0095608Whole white alabastrum(tetraploid) 255.848
CNS0095609Whole white alabastrum(tetraploid) 369.924
CNS0095610Silvery flower (tetraploid) 140.872
CNS0095611Silvery flower (tetraploid) 242.314
CNS0095612Silvery flower (tetraploid) 326.427
CNS0095613Golden flower (tetraploid) 125.684
CNS0095614Golden flower (tetraploid) 241.816
CNS0095615Golden flower (tetraploid) 325.525
CRA001975CRR073297Stem 139.851
CRR073298Stem 250.695
CRR073299Stem 340.310
CRR073300Leaf 155.121
CRR073301Leaf 248.696
CRR073302Leaf 351.789
CRR073303Juvenile bud 142.354
CRR073304Juvenile bud 234.397
CRR073305Juvenile bud 355.495
CRR073306Third green 136.638
CRR073307Third green 223.562
CRR073308Third green 330.455
CRR073309Second white 122.058
CRR073310Second white 226.381
CRR073311Second white 328.039
CRR073312Silver flowering 132.186
CRR073313Silver flowering 232.136
CRR073314Silver flowering 331.292
CRR073315Gold flowering 116.895
CRR073316Gold flowering 255.567
CRR073317Gold flowering 326.668
CRR073318Tawny withering 131.073
CRR073319Tawny withering 257.430
CRR073320Tawny withering 320.785