Detail information of GWHGAAZE031423


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP20377.10unnamed protein product [Coffea canephora]
COGYP_007201774.11E-19serine/threonine protein kinase
Swissprottr|Q40353|MMK2_MEDSA0Mitogen-activated protein kinase homolog MMK2
trEMBLtr|A0A068VIE0|A0A068VIE0_COFCA0Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165}
TAIR10AT4G01370.10MAP kinase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5871232358716629-
GWHAAZE00000009mRNA5871232358716629-
GWHAAZE00000009exon5871645158716629-
GWHAAZE00000009exon5871592458715948-
GWHAAZE00000009exon5871570658715785-
GWHAAZE00000009exon5871448458714613-
GWHAAZE00000009exon5871422558714362-
GWHAAZE00000009exon5871367058714002-
GWHAAZE00000009exon5871300558713188-
GWHAAZE00000009exon5871232358712495-
GWHAAZE00000009CDS5871645158716629-
GWHAAZE00000009CDS5871592458715948-
GWHAAZE00000009CDS5871570658715785-
GWHAAZE00000009CDS5871448458714613-
GWHAAZE00000009CDS5871422558714362-
GWHAAZE00000009CDS5871367058714002-
GWHAAZE00000009CDS5871300558713188-
GWHAAZE00000009CDS5871232358712495-
Transcript Sequence

Network for GWHGAAZE031423

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase933666.30E-66
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_MAPK

KEGG pathway

KO Enzyme pathway mapID
K20600MPK4 MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0004707molecular_functionMAP kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.522
SRR3591706second leaf26.301
SRR3591707mature leaf22.713
SRR3591708Shoot apex6.391
SRR3591709Stem1.976
SRR3591710White floral bud2.670
SRR3591711White flower1.826
SRR3591712Green floral bud5.755
SRR3591713Yellow flower1.686
SRP173429 SRR8316895Juvenile bud stage 2.145
SRR8316896Juvenile bud stage 2.897
SRR8316897Juvenile bud stage 1.605
SRR8316894Third green stage 1.194
SRR8316900Third green stage 3.588
SRR8316901Third green stage 3.320
SRR8316898Complete white stage 0.530
SRR8316899Complete white stage 2.038
SRR8316903Complete white stage 0.561
SRR8316902Silver flowering stage0.643
SRR8316904Silver flowering stage0.812
SRR8316905Silver flowering stage0.196
SRR8316906Gold flowering stage 1.651
SRR8316907Gold flowering stage 0.460
SRR8316908Gold flowering stage 0.807
SRP132670SRR6706286Control4.535
SRR6706287Light intensity 50%4.308
SRR6706288Light intensity 20%4.435
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.919
CNS0095593Slightly white alabastrum(diploid) 22.709
CNS0095594Slightly white alabastrum(diploid) 32.885
CNS0095595Whole white alabastrum(diploid) 21.241
CNS0095596Whole white alabastrum(diploid) 30.821
CNS0095597Whole white alabastrum(diploid) 40.397
CNS0095598Silvery flower (diploied) 10.889
CNS0095599Silvery flower (diploied) 20.246
CNS0095600Silvery flower (diploied) 31.075
CNS0095601Golden flower (diploid) 11.281
CNS0095602Golden flower (diploid) 20.761
CNS0095603Golden flower (diploid) 30.689
CNS0095604Slightly white alabastrum(tetraploid) 12.641
CNS0095605Slightly white alabastrum(tetraploid) 22.422
CNS0095606Slightly white alabastrum(tetraploid) 34.357
CNS0095607Whole white alabastrum(tetraploid) 11.069
CNS0095608Whole white alabastrum(tetraploid) 20.715
CNS0095609Whole white alabastrum(tetraploid) 33.516
CNS0095610Silvery flower (tetraploid) 11.344
CNS0095611Silvery flower (tetraploid) 21.201
CNS0095612Silvery flower (tetraploid) 30.913
CNS0095613Golden flower (tetraploid) 10.290
CNS0095614Golden flower (tetraploid) 20.845
CNS0095615Golden flower (tetraploid) 30.846
CRA001975CRR073297Stem 15.256
CRR073298Stem 25.829
CRR073299Stem 32.633
CRR073300Leaf 16.491
CRR073301Leaf 28.490
CRR073302Leaf 32.784
CRR073303Juvenile bud 13.436
CRR073304Juvenile bud 24.582
CRR073305Juvenile bud 33.598
CRR073306Third green 12.072
CRR073307Third green 20.726
CRR073308Third green 30.893
CRR073309Second white 11.165
CRR073310Second white 22.002
CRR073311Second white 31.378
CRR073312Silver flowering 11.577
CRR073313Silver flowering 21.700
CRR073314Silver flowering 30.607
CRR073315Gold flowering 111.294
CRR073316Gold flowering 214.734
CRR073317Gold flowering 314.741
CRR073318Tawny withering 11.386
CRR073319Tawny withering 20.418
CRR073320Tawny withering 31.152