Detail information of GWHGAAZE031394


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273474.10PREDICTED: acyl-coenzyme A thioesterase 8 [Vitis vinifera]
COGNP_252631.12E-69acyl-CoA thioesterase
trEMBLtr|D7UC96|D7UC96_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI40361.3}
TAIR10AT1G01710.19E-164Acyl-CoA thioesterase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5831271858320525-
GWHAAZE00000009mRNA5831271858320525-
GWHAAZE00000009exon5831271858312795-
GWHAAZE00000009exon5831297858313026-
GWHAAZE00000009exon5831322258313323-
GWHAAZE00000009exon5831422258314278-
GWHAAZE00000009exon5831438058314484-
GWHAAZE00000009exon5831548858315543-
GWHAAZE00000009exon5831564258315704-
GWHAAZE00000009exon5831638558316497-
GWHAAZE00000009exon5831687458316948-
GWHAAZE00000009exon5831805458318135-
GWHAAZE00000009exon5831883358318958-
GWHAAZE00000009exon5831908758319166-
GWHAAZE00000009exon5831949758319578-
GWHAAZE00000009exon5831967858319745-
GWHAAZE00000009exon5832031858320410-
GWHAAZE00000009exon5832049858320525-
GWHAAZE00000009CDS5832049858320525-
GWHAAZE00000009CDS5832031858320410-
GWHAAZE00000009CDS5831967858319745-
GWHAAZE00000009CDS5831949758319578-
GWHAAZE00000009CDS5831908758319166-
GWHAAZE00000009CDS5831883358318958-
GWHAAZE00000009CDS5831805458318135-
GWHAAZE00000009CDS5831687458316948-
GWHAAZE00000009CDS5831638558316497-
GWHAAZE00000009CDS5831564258315704-
GWHAAZE00000009CDS5831548858315543-
GWHAAZE00000009CDS5831438058314484-
GWHAAZE00000009CDS5831422258314278-
GWHAAZE00000009CDS5831322258313323-
GWHAAZE00000009CDS5831297858313026-
GWHAAZE00000009CDS5831271858312795-
Transcript Sequence

Network for GWHGAAZE031394

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00027.30cNMP_binding381081.00E-07
PF13622.74HBT_31764163.00E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01068ACOT1_2_4 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid elongationmap00062
Biosynthesis of unsaturated fatty acidsmap01040
Ovarian steroidogenesismap04913

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.806
SRR3591706second leaf29.652
SRR3591707mature leaf28.995
SRR3591708Shoot apex27.994
SRR3591709Stem35.572
SRR3591710White floral bud30.523
SRR3591711White flower34.274
SRR3591712Green floral bud30.223
SRR3591713Yellow flower32.380
SRP173429 SRR8316895Juvenile bud stage 28.153
SRR8316896Juvenile bud stage 46.637
SRR8316897Juvenile bud stage 25.272
SRR8316894Third green stage 16.967
SRR8316900Third green stage 36.839
SRR8316901Third green stage 45.540
SRR8316898Complete white stage 14.097
SRR8316899Complete white stage 41.955
SRR8316903Complete white stage 24.673
SRR8316902Silver flowering stage14.995
SRR8316904Silver flowering stage19.924
SRR8316905Silver flowering stage8.348
SRR8316906Gold flowering stage 35.902
SRR8316907Gold flowering stage 37.858
SRR8316908Gold flowering stage 40.466
SRP132670SRR6706286Control37.929
SRR6706287Light intensity 50%38.903
SRR6706288Light intensity 20%38.884
CNP0000432CNS0095592Slightly white alabastrum(diploid) 137.135
CNS0095593Slightly white alabastrum(diploid) 230.110
CNS0095594Slightly white alabastrum(diploid) 340.054
CNS0095595Whole white alabastrum(diploid) 230.027
CNS0095596Whole white alabastrum(diploid) 330.948
CNS0095597Whole white alabastrum(diploid) 427.155
CNS0095598Silvery flower (diploied) 135.025
CNS0095599Silvery flower (diploied) 230.145
CNS0095600Silvery flower (diploied) 330.517
CNS0095601Golden flower (diploid) 128.547
CNS0095602Golden flower (diploid) 231.466
CNS0095603Golden flower (diploid) 332.581
CNS0095604Slightly white alabastrum(tetraploid) 147.406
CNS0095605Slightly white alabastrum(tetraploid) 243.019
CNS0095606Slightly white alabastrum(tetraploid) 341.053
CNS0095607Whole white alabastrum(tetraploid) 137.256
CNS0095608Whole white alabastrum(tetraploid) 228.200
CNS0095609Whole white alabastrum(tetraploid) 341.489
CNS0095610Silvery flower (tetraploid) 151.607
CNS0095611Silvery flower (tetraploid) 247.754
CNS0095612Silvery flower (tetraploid) 345.513
CNS0095613Golden flower (tetraploid) 130.824
CNS0095614Golden flower (tetraploid) 242.105
CNS0095615Golden flower (tetraploid) 332.274
CRA001975CRR073297Stem 150.960
CRR073298Stem 241.562
CRR073299Stem 336.924
CRR073300Leaf 142.565
CRR073301Leaf 241.265
CRR073302Leaf 334.635
CRR073303Juvenile bud 133.796
CRR073304Juvenile bud 224.964
CRR073305Juvenile bud 339.114
CRR073306Third green 111.417
CRR073307Third green 212.923
CRR073308Third green 314.155
CRR073309Second white 115.968
CRR073310Second white 221.379
CRR073311Second white 324.028
CRR073312Silver flowering 117.495
CRR073313Silver flowering 216.181
CRR073314Silver flowering 314.791
CRR073315Gold flowering 120.865
CRR073316Gold flowering 225.667
CRR073317Gold flowering 317.970
CRR073318Tawny withering 133.629
CRR073319Tawny withering 233.809
CRR073320Tawny withering 332.262