Gene detail

Detail information of GWHGAAZE031391

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP28638.1	0	hypothetical protein JCGZ_14409 [Jatropha curcas]
COG	YP_008151634.1	1E-25	hypothetical protein SCE1572_26190
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	2E-42	Serine/threonine-protein kinase EDR1
trEMBL	tr\|A0A067K0Q0\|A0A067K0Q0_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP28638.1}
TAIR10	AT1G14000.1	6E-65	VH1-interacting kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	58286146	58292667	-
GWHAAZE00000009	mRNA	58286146	58292667	-
GWHAAZE00000009	exon	58286146	58286642	-
GWHAAZE00000009	exon	58287332	58287450	-
GWHAAZE00000009	exon	58287585	58287670	-
GWHAAZE00000009	exon	58287746	58287858	-
GWHAAZE00000009	exon	58288273	58288335	-
GWHAAZE00000009	exon	58288601	58288680	-
GWHAAZE00000009	exon	58288760	58288880	-
GWHAAZE00000009	exon	58289237	58289331	-
GWHAAZE00000009	exon	58289522	58289602	-
GWHAAZE00000009	exon	58290654	58290728	-
GWHAAZE00000009	exon	58292388	58292455	-
GWHAAZE00000009	exon	58292560	58292667	-
GWHAAZE00000009	five_prime_UTR	58292560	58292667	-
GWHAAZE00000009	five_prime_UTR	58292421	58292455	-
GWHAAZE00000009	CDS	58292388	58292420	-
GWHAAZE00000009	CDS	58290654	58290728	-
GWHAAZE00000009	CDS	58289522	58289602	-
GWHAAZE00000009	CDS	58289237	58289331	-
GWHAAZE00000009	CDS	58288760	58288880	-
GWHAAZE00000009	CDS	58288601	58288680	-
GWHAAZE00000009	CDS	58288273	58288335	-
GWHAAZE00000009	CDS	58287746	58287858	-
GWHAAZE00000009	CDS	58287585	58287670	-
GWHAAZE00000009	CDS	58287332	58287450	-
GWHAAZE00000009	CDS	58286510	58286642	-
GWHAAZE00000009	three_prime_UTR	58286146	58286509	-

Transcript Sequence
>GWHTAAZE031427 CAAACTTCCGTCCCTTGGCAACTCAGACCACACCTTTGTTATTATTTCCCACTGGTCAAACAAACTCTAACTTCATTATCAACAACATTGTTACATAAAAGATTCAATTGCTGCTTTTTTTTGTGATTGTAATTTCTAACAAAATGGAAATGGAAGTCTCTACATCACCACCAAAGCCGCTATCAGATGCCCGTAGTTCAGGCCATGAGGATATTTGCAAAATTTTGGAGGCACATGGTGGAATTGATCCGGTGGGACTAGATTCTCAGACCCCATGTTATGAAATCGATCACACTGAAGTGGACATGAAAGGAGCTACACTTATTGGGGAAGGTGCATATGGTGAAGTTTATTTAGTGAAGTGGCGTGGTACAGAAGTTGCTGCAAAAACAATTCGTTCTGCTATTGCTTCAAACCAAATGGTGAAGAAAACCTTTCTAAAGGAACTAGGTTTGTGGCAGAAGTTGCGCCACCCCAATATAGTGCAGTTCCTTGGTGTTCTAAATGACTCTGATCGCTTGATATTCCTCACTGAGTATCTCTGCAATGGAAGTTTGTATGATATCTTAAGAAAGAAAGGAAAACTTGATCCAATGACAGCTGTTTCTTATGCCTTAGATATTGCGAGAGGTATGAATTATCTCCATCAGCATAAACCACATGCCATAATACACCGGGATTTGACCCCAAGAAATGTATTGCAAGACGAAGCAGGGCACCTTAAAGTGACAGACTTTGGCTTAAGCAAAATCGCACAGGAAAAAGATGCTCTTGGTTATAAAATGACTGGTGGAACAGGATCATATCGTTACATGGCTCCCGAGGTTTATCGCCGAGAATCATATGGGAAGAGCATTGATGTCTTTTCCTTTGCTCTAATAGTACATGAAATGTTCCAAGGCGGACCATCAAATAGGGAAGAAGCCGCAGAGCAAGTTGCGGACAAGAGAGCATATGAAGATAGACGGCCTTATCTTTCTTCATATATATACCCTGAACCAATCAAGTTGCTTCTTCAAGACTGCTGGCACAAGAATCCGGAGTGTCGGCCTACGTTTGAAGAAATAATTTTACAGCTGGAGATGATCCAAGAAAAGCAAACCAAGGACACTGAAAAATGTTGTAGCTGTGTTATTTTATAAAGTAGATTACACCAGTAGCCTCTGAGCTGTGCCACGTGTACCAATTTGACTCTTAAATCTATTCTTCTGTTAAAATTTGGCCCTCCAAGGGCATGGAGTTATCTACTGTGGCCCCTCCGAGAGTCGGTTTCTACCGTTTAATCTAGCAGATTGGCCCATTCGAAGCTGAAATGACTTGTCATTGAACTAACCCGCTACCCGATTACTGTGTCGACCCGACCCAAGTTCTTCAACCTCCATAGCATGGATCTCTTTCTGTCGGACCGTCACTGGCCTCCATGATTTAAGAGGTTACTTGTACATTTCTGACACTGGCCAATTAATAGCACTGAGAACCATCCTTGCCGAAGAAACCCATTGTATT

Network for GWHGAAZE031391

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	59	312	1.20E-56

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	TKL-Pl-5

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.474
	SRR3591706	second leaf	1.522
	SRR3591707	mature leaf	0.982
	SRR3591708	Shoot apex	5.585
	SRR3591709	Stem	0.197
	SRR3591710	White floral bud	0.199
	SRR3591711	White flower	0.246
	SRR3591712	Green floral bud	0.365
	SRR3591713	Yellow flower	0.074
SRP173429	SRR8316895	Juvenile bud stage	2.880
	SRR8316896	Juvenile bud stage	2.875
	SRR8316897	Juvenile bud stage	1.529
	SRR8316894	Third green stage	1.122
	SRR8316900	Third green stage	0.726
	SRR8316901	Third green stage	1.411
	SRR8316898	Complete white stage	0.106
	SRR8316899	Complete white stage	0.773
	SRR8316903	Complete white stage	0.245
	SRR8316902	Silver flowering stage	0.020
	SRR8316904	Silver flowering stage	0.046
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.054
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.052
SRP132670	SRR6706286	Control	0.193
	SRR6706287	Light intensity 50%	0.459
	SRR6706288	Light intensity 20%	0.509
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.558
	CNS0095593	Slightly white alabastrum(diploid) 2	0.284
	CNS0095594	Slightly white alabastrum(diploid) 3	1.866
	CNS0095595	Whole white alabastrum(diploid) 2	0.942
	CNS0095596	Whole white alabastrum(diploid) 3	0.665
	CNS0095597	Whole white alabastrum(diploid) 4	0.741
	CNS0095598	Silvery flower (diploied) 1	0.502
	CNS0095599	Silvery flower (diploied) 2	0.317
	CNS0095600	Silvery flower (diploied) 3	0.244
	CNS0095601	Golden flower (diploid) 1	0.361
	CNS0095602	Golden flower (diploid) 2	0.352
	CNS0095603	Golden flower (diploid) 3	0.274
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.606
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.382
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.742
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.052
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.535
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.391
	CNS0095610	Silvery flower (tetraploid) 1	0.066
	CNS0095611	Silvery flower (tetraploid) 2	0.101
	CNS0095612	Silvery flower (tetraploid) 3	0.262
	CNS0095613	Golden flower (tetraploid) 1	0.023
	CNS0095614	Golden flower (tetraploid) 2	0.243
	CNS0095615	Golden flower (tetraploid) 3	0.185
CRA001975	CRR073297	Stem 1	3.558
	CRR073298	Stem 2	1.955
	CRR073299	Stem 3	1.267
	CRR073300	Leaf 1	0.783
	CRR073301	Leaf 2	1.134
	CRR073302	Leaf 3	0.197
	CRR073303	Juvenile bud 1	0.170
	CRR073304	Juvenile bud 2	0.118
	CRR073305	Juvenile bud 3	0.303
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.003
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.224
	CRR073313	Silver flowering 2	0.106
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.272
	CRR073316	Gold flowering 2	0.401
	CRR073317	Gold flowering 3	0.195
	CRR073318	Tawny withering 1	0.163
	CRR073319	Tawny withering 2	0.586
	CRR073320	Tawny withering 3	0.244