Detail information of GWHGAAZE031390


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273879.20PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Vitis vinifera]
COGYP_007149628.13E-71diaminohydroxyphosphoribosylaminopyrimidine deaminase
Swissprottr|Q8GWP5|RIBD_ARATH1E-141Inactive 5-amino-6-(5-phosphoribosylamino)uracil reductase (Precursor)
trEMBLtr|A0A067K0Q0|A0A067K0Q0_JATCU1E-178Uncharacterized protein {ECO:0000313|EMBL:KDP28638.1}
TAIR10AT4G20960.11E-114Cytidine/deoxycytidylate deaminase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5826634458277109-
GWHAAZE00000009mRNA5826634458277109-
GWHAAZE00000009exon5827687658277109-
GWHAAZE00000009exon5827604658276120-
GWHAAZE00000009exon5827563458275711-
GWHAAZE00000009exon5827540958275503-
GWHAAZE00000009exon5827488558275005-
GWHAAZE00000009exon5827470558274784-
GWHAAZE00000009exon5827400158274063-
GWHAAZE00000009exon5827378258273888-
GWHAAZE00000009exon5827360758273692-
GWHAAZE00000009exon5827334058273458-
GWHAAZE00000009exon5827104358271292-
GWHAAZE00000009exon5827046858270533-
GWHAAZE00000009exon5826958358269881-
GWHAAZE00000009exon5826634458266953-
GWHAAZE00000009CDS5827687658277109-
GWHAAZE00000009CDS5827604658276120-
GWHAAZE00000009CDS5827563458275711-
GWHAAZE00000009CDS5827540958275503-
GWHAAZE00000009CDS5827488558275005-
GWHAAZE00000009CDS5827470558274784-
GWHAAZE00000009CDS5827400158274063-
GWHAAZE00000009CDS5827378258273888-
GWHAAZE00000009CDS5827360758273692-
GWHAAZE00000009CDS5827334058273458-
GWHAAZE00000009CDS5827104358271292-
GWHAAZE00000009CDS5827046858270533-
GWHAAZE00000009CDS5826958358269881-
GWHAAZE00000009CDS5826634458266953-
Transcript Sequence

Network for GWHGAAZE031390

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12796.8Ank_2261002.70E-09
PF00069.26Pkinase1243266.40E-40
PF00383.24dCMP_cyt_deam_13885068.10E-16
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-5

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0009231biological_processriboflavin biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0003824molecular_functioncatalytic activity
GO:0008835molecular_functiondiaminohydroxyphosphoribosylaminopyrimidine deaminase activity
GO:0005515molecular_functionprotein binding
GO:0008703molecular_function5-amino-6-(5-phosphoribosylamino)uracil reductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.882
SRR3591706second leaf7.522
SRR3591707mature leaf6.514
SRR3591708Shoot apex9.233
SRR3591709Stem8.832
SRR3591710White floral bud6.874
SRR3591711White flower8.925
SRR3591712Green floral bud7.683
SRR3591713Yellow flower10.047
SRP173429 SRR8316895Juvenile bud stage 4.180
SRR8316896Juvenile bud stage 5.347
SRR8316897Juvenile bud stage 2.397
SRR8316894Third green stage 2.220
SRR8316900Third green stage 7.590
SRR8316901Third green stage 5.729
SRR8316898Complete white stage 3.046
SRR8316899Complete white stage 9.975
SRR8316903Complete white stage 3.955
SRR8316902Silver flowering stage2.291
SRR8316904Silver flowering stage3.729
SRR8316905Silver flowering stage2.061
SRR8316906Gold flowering stage 6.888
SRR8316907Gold flowering stage 6.996
SRR8316908Gold flowering stage 7.407
SRP132670SRR6706286Control5.749
SRR6706287Light intensity 50%5.822
SRR6706288Light intensity 20%6.425
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.336
CNS0095593Slightly white alabastrum(diploid) 24.701
CNS0095594Slightly white alabastrum(diploid) 34.222
CNS0095595Whole white alabastrum(diploid) 24.353
CNS0095596Whole white alabastrum(diploid) 34.977
CNS0095597Whole white alabastrum(diploid) 44.102
CNS0095598Silvery flower (diploied) 16.475
CNS0095599Silvery flower (diploied) 26.060
CNS0095600Silvery flower (diploied) 37.162
CNS0095601Golden flower (diploid) 15.015
CNS0095602Golden flower (diploid) 26.542
CNS0095603Golden flower (diploid) 37.667
CNS0095604Slightly white alabastrum(tetraploid) 14.981
CNS0095605Slightly white alabastrum(tetraploid) 24.846
CNS0095606Slightly white alabastrum(tetraploid) 37.394
CNS0095607Whole white alabastrum(tetraploid) 11.678
CNS0095608Whole white alabastrum(tetraploid) 22.383
CNS0095609Whole white alabastrum(tetraploid) 35.678
CNS0095610Silvery flower (tetraploid) 16.455
CNS0095611Silvery flower (tetraploid) 27.347
CNS0095612Silvery flower (tetraploid) 35.378
CNS0095613Golden flower (tetraploid) 14.656
CNS0095614Golden flower (tetraploid) 27.466
CNS0095615Golden flower (tetraploid) 34.532
CRA001975CRR073297Stem 14.072
CRR073298Stem 24.390
CRR073299Stem 33.250
CRR073300Leaf 14.903
CRR073301Leaf 24.535
CRR073302Leaf 34.246
CRR073303Juvenile bud 14.132
CRR073304Juvenile bud 23.256
CRR073305Juvenile bud 33.772
CRR073306Third green 11.163
CRR073307Third green 21.560
CRR073308Third green 31.538
CRR073309Second white 10.987
CRR073310Second white 21.927
CRR073311Second white 31.173
CRR073312Silver flowering 12.007
CRR073313Silver flowering 21.145
CRR073314Silver flowering 30.822
CRR073315Gold flowering 13.509
CRR073316Gold flowering 25.012
CRR073317Gold flowering 33.469
CRR073318Tawny withering 12.623
CRR073319Tawny withering 21.442
CRR073320Tawny withering 32.788