Gene detail

Detail information of GWHGAAZE031359

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_010661562.1	PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X2 [Vitis vinifera]
Swissprot	tr\|Q0WV12\|ANL2_ARATH	Homeobox-leucine zipper protein ANTHOCYANINLESS 2
trEMBL	tr\|A5BH09\|A5BH09_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN61351.1}
TAIR10	AT4G00730.1	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	57812137	57818090	+
GWHAAZE00000009	mRNA	57812137	57818090	+
GWHAAZE00000009	exon	57812137	57812226	+
GWHAAZE00000009	exon	57812325	57812539	+
GWHAAZE00000009	exon	57812641	57812758	+
GWHAAZE00000009	exon	57812864	57813535	+
GWHAAZE00000009	exon	57813640	57813741	+
GWHAAZE00000009	exon	57813956	57814168	+
GWHAAZE00000009	exon	57816037	57816211	+
GWHAAZE00000009	exon	57816730	57817076	+
GWHAAZE00000009	exon	57817689	57818090	+
GWHAAZE00000009	CDS	57812137	57812226	+
GWHAAZE00000009	CDS	57812325	57812539	+
GWHAAZE00000009	CDS	57812641	57812758	+
GWHAAZE00000009	CDS	57812864	57813535	+
GWHAAZE00000009	CDS	57813640	57813741	+
GWHAAZE00000009	CDS	57813956	57814168	+
GWHAAZE00000009	CDS	57816037	57816211	+
GWHAAZE00000009	CDS	57816730	57817076	+
GWHAAZE00000009	CDS	57817689	57818090	+

Transcript Sequence
>GWHTAAZE031395 ATGCCCACCGCTGCAATTTCTCAGCCTCGCCTTGTCACTCACTCTCTTGCCAAATCCATGTTCACGTCACCCGGCCTCTCTCTTGCTCTTCAATCAAGTATGGAGGGTCAAGGTGAGGTGGCAAGAATTGGTGAAAATTACGAGTCTAGTGTGGGCAGAAGAAGCAGAGATGAAGAGCATGAGAGCAGATCTGGTAGTGATAACATGGATGGTGCCTCCGGTGATGATCAAGATGCCGATGATAAGCCGCCGAGAAAGAAGAGATACCACCGACACACCCCTCAGCAAATCCAAGAGCTTGAAGCTCTCTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAGAGGCTGGAACTCAGTAGAAGGCTTTCCTTGGAGACCCGGCAAGTTAAGTTTTGGTTTCAAAATCGTAGAACACAAATGAAGACCCAATTGGAACGCCATGAGAACTCGATACTAAGGCAAGAAAATGATAAACTTCGGGCTGAAAACATGTCGATTAGAGAAGCTATGAGGAACCCAGTTTGCACCAACTGTGGTGGACCAGCAATAATTGGTGACATATCCATAGAAGAGCAGCACCTAAGAATAGAAAATGTGCGTTTAAAAGATGAATTAGACCGCGTTTGTGCTCTTGCAGGCAAGTTTTTGGGCCGCCCCATTTCATCTATGGCTCCTTCGATGCCCAGTTCGAGCTTGGAACTAGGAGTTGGAATCAATGGATTTGGTGGGTTGAGTACTGTGGGAACGACACTACCATTGGGGCCTCCCGATTTTGGTGGCCCTATGGCGGTGACACCTCCGGCTAGAACAACAAATGGTGTAACAGGGATAGAGAGATCCTTTGAGAGATCTATGTATTTGGAACTTGCTTTGGCTGCCATGGATGAGTTGGTTAAGATGGCCCAGAGTGATGAGCCTCTTTGGCTAAGGAGCGGCCTAGAAGGTGGAAGGGAGATATTAAATCTCGAAGAGTACTCTAGGACTTTTACTCCTTGCATTGGATTAAAACCCAACGGTTTTGTCAGTGAGGGCTCAAGGGAAACTGGTATGGTAATCATCAACAGTTTGGCTCTCGTTGAGACGCTAATGGACTCTAATAAGTGGGCGGAGATGTTTCCTTGTCTGATTGCAAGAACCTCTACAACGGAGGTGATATCGAGTGGTATGGGAGAAACGAGAAATGGTGCACTTCAACTGATGCACGCAGAGCTTCAAGTGCTTTCGCCATTGGTGCCTGTTAGAGAGATAAATTTCATCCGCTTCTGCAAGCAGCACTCTGAGGGGGTGTGGGCTGTGGTGGATGTGTCCATTGATAACATCAGAGAAACATCAGGTCCATCTTCATTTGTCAACTGTCGGAGGCTTCCTTCGGGCTGTGTTGTGCAAGATATGCCCAATGGGTACTCAAAGGTTACGTGGGTAGAGCACACAGAATATGATGAAAGTGCAGTCCACCAACTATACCGGCCTTTGATCAGCGCCGGCATGGGCTTCGGCGCCCAAAGATGGGTAGCAACCCTCCAACGACAGTGTGAATGCCTCGCAATCTTAATGTCATCCTCAGTTCCAACCAGAGATCACAACCCAATAACTGCGGTTGGGCGAAGAAGCATGCTGAAGTTAGCACAGCGAATGACTGATAATTTCTGTGCGGGTGTTTGCGCTTCGACGGTGCACAAGTGGAACAAGCTCTGTGCTGGGAATGTGGATGAAGATGTGCGGGTCATGACCCGTCAGAGTGTGGACGACCCGGGTGAGCCGCCGGGTATTGTTTTGAGTGCGGCCACTTCGGTTTGGTTGCCGGTGTCTCCACAGAGGTTGTTCGACTTTCTAAGGAATGAACGGCTGAGAAGTGAGTGGGATATATTATCCAACGGTGGGCCCATGCAAGAAATGGCTCACATTGCCAAAGGACAAGATCATGGCAATTGCGCCATAAATTCCAGCCAGAGCAGCATGCTGATCCTGCAAGAGACATGCATAGATGCGGCGGGGTCGCTTGTGGTTTACGCGCCTGTAGATATTCCGGCAATGCACGTGGTCATGAACGGTGGTGATTCAGCCTACGTGGCGCTCCTGCCCTCTGGGTTCGCAATCGTACCGGATGGCCCACCTTCTCGTGGGCCTAGTAGTAATGGCAATTTGTCCAACGGGCCCAGCAGCAATATGGGCCCAGTGCATAGGGACGGTGGGTCTCTCTTGACGGTGGCCTTTCAGATTCTAGTGAATAGTCTCCCTACGGCGAAACTCACTGTAGAGTCGGTGGAGACGGTCAACAATCTCATCTCGTGTACGGTTCAGAAAATCAAGGCTGCTCTTCAATGTGAGAGCTGA

Network for GWHGAAZE031359

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00046.30	Homeodomain	86	141	1.10E-18
PF01852.20	START	288	513	1.10E-55

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	HB-HD-ZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0008289	molecular_function	lipid binding
GO:0043565	molecular_function	sequence-specific DNA binding
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	17.370
	SRR3591706	second leaf	82.048
	SRR3591707	mature leaf	65.270
	SRR3591708	Shoot apex	52.442
	SRR3591709	Stem	7.750
	SRR3591710	White floral bud	20.567
	SRR3591711	White flower	26.133
	SRR3591712	Green floral bud	27.366
	SRR3591713	Yellow flower	8.929
SRP173429	SRR8316895	Juvenile bud stage	21.872
	SRR8316896	Juvenile bud stage	25.201
	SRR8316897	Juvenile bud stage	12.118
	SRR8316894	Third green stage	12.368
	SRR8316900	Third green stage	28.120
	SRR8316901	Third green stage	27.180
	SRR8316898	Complete white stage	5.600
	SRR8316899	Complete white stage	33.541
	SRR8316903	Complete white stage	9.682
	SRR8316902	Silver flowering stage	6.493
	SRR8316904	Silver flowering stage	8.140
	SRR8316905	Silver flowering stage	2.909
	SRR8316906	Gold flowering stage	8.887
	SRR8316907	Gold flowering stage	6.149
	SRR8316908	Gold flowering stage	9.379
SRP132670	SRR6706286	Control	26.888
	SRR6706287	Light intensity 50%	31.039
	SRR6706288	Light intensity 20%	31.287
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	11.489
	CNS0095593	Slightly white alabastrum(diploid) 2	11.818
	CNS0095594	Slightly white alabastrum(diploid) 3	11.384
	CNS0095595	Whole white alabastrum(diploid) 2	9.154
	CNS0095596	Whole white alabastrum(diploid) 3	7.614
	CNS0095597	Whole white alabastrum(diploid) 4	8.664
	CNS0095598	Silvery flower (diploied) 1	29.355
	CNS0095599	Silvery flower (diploied) 2	15.315
	CNS0095600	Silvery flower (diploied) 3	18.412
	CNS0095601	Golden flower (diploid) 1	18.616
	CNS0095602	Golden flower (diploid) 2	14.258
	CNS0095603	Golden flower (diploid) 3	13.709
	CNS0095604	Slightly white alabastrum(tetraploid) 1	24.203
	CNS0095605	Slightly white alabastrum(tetraploid) 2	16.883
	CNS0095606	Slightly white alabastrum(tetraploid) 3	64.530
	CNS0095607	Whole white alabastrum(tetraploid) 1	14.254
	CNS0095608	Whole white alabastrum(tetraploid) 2	8.366
	CNS0095609	Whole white alabastrum(tetraploid) 3	30.575
	CNS0095610	Silvery flower (tetraploid) 1	26.719
	CNS0095611	Silvery flower (tetraploid) 2	24.912
	CNS0095612	Silvery flower (tetraploid) 3	18.409
	CNS0095613	Golden flower (tetraploid) 1	5.924
	CNS0095614	Golden flower (tetraploid) 2	23.565
	CNS0095615	Golden flower (tetraploid) 3	8.114
CRA001975	CRR073297	Stem 1	51.934
	CRR073298	Stem 2	46.397
	CRR073299	Stem 3	35.697
	CRR073300	Leaf 1	44.016
	CRR073301	Leaf 2	49.778
	CRR073302	Leaf 3	35.316
	CRR073303	Juvenile bud 1	21.707
	CRR073304	Juvenile bud 2	15.983
	CRR073305	Juvenile bud 3	36.406
	CRR073306	Third green 1	9.258
	CRR073307	Third green 2	5.393
	CRR073308	Third green 3	8.771
	CRR073309	Second white 1	9.627
	CRR073310	Second white 2	8.596
	CRR073311	Second white 3	7.071
	CRR073312	Silver flowering 1	3.816
	CRR073313	Silver flowering 2	4.324
	CRR073314	Silver flowering 3	3.396
	CRR073315	Gold flowering 1	55.950
	CRR073316	Gold flowering 2	71.410
	CRR073317	Gold flowering 3	64.838
	CRR073318	Tawny withering 1	9.133
	CRR073319	Tawny withering 2	6.935
	CRR073320	Tawny withering 3	2.388