Detail information of GWHGAAZE031339


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007051985.10Galacturonosyltransferase 1 [Theobroma cacao]
COGYP_007713204.10.0000004hypothetical protein MMALV_05390
Swissprottr|Q9LE59|GAUT1_ARATH0Polygalacturonate 4-alpha-galacturonosyltransferase
trEMBLtr|A0A061DUT4|A0A061DUT4_THECC0Galacturonosyltransferase 1 {ECO:0000313|EMBL:EOX96142.1}
TAIR10AT3G61130.10galacturonosyltransferase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5738475957397641-
GWHAAZE00000009mRNA5738475957397641-
GWHAAZE00000009exon5739753157397641-
GWHAAZE00000009exon5739670457396835-
GWHAAZE00000009exon5739636657396443-
GWHAAZE00000009exon5739357557393731-
GWHAAZE00000009exon5739067557390709-
GWHAAZE00000009exon5739001457390151-
GWHAAZE00000009exon5738982157389887-
GWHAAZE00000009exon5738862457388969-
GWHAAZE00000009exon5738748557387842-
GWHAAZE00000009exon5738608457386671-
GWHAAZE00000009exon5738475957385034-
GWHAAZE00000009CDS5739753157397641-
GWHAAZE00000009CDS5739670457396835-
GWHAAZE00000009CDS5739636657396443-
GWHAAZE00000009CDS5739357557393731-
GWHAAZE00000009CDS5739067557390709-
GWHAAZE00000009CDS5739001457390151-
GWHAAZE00000009CDS5738982157389887-
GWHAAZE00000009CDS5738862457388969-
GWHAAZE00000009CDS5738748557387842-
GWHAAZE00000009CDS5738608457386671-
GWHAAZE00000009CDS5738475957385034-
Transcript Sequence

Network for GWHGAAZE031339

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06487.13SAP182716.80E-16
PF01501.21Glyco_transf_84197341.30E-95
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13648GAUT Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf68.275
SRR3591706second leaf45.930
SRR3591707mature leaf25.326
SRR3591708Shoot apex59.075
SRR3591709Stem48.897
SRR3591710White floral bud57.001
SRR3591711White flower45.851
SRR3591712Green floral bud74.927
SRR3591713Yellow flower40.948
SRP173429 SRR8316895Juvenile bud stage 38.148
SRR8316896Juvenile bud stage 51.022
SRR8316897Juvenile bud stage 27.925
SRR8316894Third green stage 23.327
SRR8316900Third green stage 62.000
SRR8316901Third green stage 62.837
SRR8316898Complete white stage 17.238
SRR8316899Complete white stage 61.664
SRR8316903Complete white stage 37.698
SRR8316902Silver flowering stage17.758
SRR8316904Silver flowering stage28.201
SRR8316905Silver flowering stage12.599
SRR8316906Gold flowering stage 32.696
SRR8316907Gold flowering stage 33.714
SRR8316908Gold flowering stage 38.723
SRP132670SRR6706286Control54.628
SRR6706287Light intensity 50%56.622
SRR6706288Light intensity 20%58.367
CNP0000432CNS0095592Slightly white alabastrum(diploid) 139.319
CNS0095593Slightly white alabastrum(diploid) 244.330
CNS0095594Slightly white alabastrum(diploid) 336.507
CNS0095595Whole white alabastrum(diploid) 242.783
CNS0095596Whole white alabastrum(diploid) 343.080
CNS0095597Whole white alabastrum(diploid) 438.744
CNS0095598Silvery flower (diploied) 136.284
CNS0095599Silvery flower (diploied) 228.703
CNS0095600Silvery flower (diploied) 344.606
CNS0095601Golden flower (diploid) 130.668
CNS0095602Golden flower (diploid) 243.353
CNS0095603Golden flower (diploid) 341.962
CNS0095604Slightly white alabastrum(tetraploid) 153.327
CNS0095605Slightly white alabastrum(tetraploid) 244.988
CNS0095606Slightly white alabastrum(tetraploid) 380.285
CNS0095607Whole white alabastrum(tetraploid) 148.276
CNS0095608Whole white alabastrum(tetraploid) 246.257
CNS0095609Whole white alabastrum(tetraploid) 367.390
CNS0095610Silvery flower (tetraploid) 144.757
CNS0095611Silvery flower (tetraploid) 239.982
CNS0095612Silvery flower (tetraploid) 344.619
CNS0095613Golden flower (tetraploid) 131.733
CNS0095614Golden flower (tetraploid) 240.524
CNS0095615Golden flower (tetraploid) 340.818
CRA001975CRR073297Stem 152.418
CRR073298Stem 247.028
CRR073299Stem 343.344
CRR073300Leaf 149.161
CRR073301Leaf 244.501
CRR073302Leaf 342.774
CRR073303Juvenile bud 138.881
CRR073304Juvenile bud 237.057
CRR073305Juvenile bud 339.488
CRR073306Third green 118.116
CRR073307Third green 221.511
CRR073308Third green 323.003
CRR073309Second white 121.416
CRR073310Second white 217.818
CRR073311Second white 320.369
CRR073312Silver flowering 120.535
CRR073313Silver flowering 223.074
CRR073314Silver flowering 320.328
CRR073315Gold flowering 124.662
CRR073316Gold flowering 229.915
CRR073317Gold flowering 322.411
CRR073318Tawny withering 146.055
CRR073319Tawny withering 235.975
CRR073320Tawny withering 350.402