Gene detail

Detail information of GWHGAAZE031327

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011091018.1	1.9813E-176	PREDICTED: serine/threonine-protein kinase Aurora-3 isoform X1 [Sesamum indicum]
COG	YP_003372407.1	9E-37	serine/threonine protein kinase
Swissprot	tr\|O64629\|AUR3_ARATH	1E-167	Serine/threonine-protein kinase Aurora-3
trEMBL	tr\|A0A067JY03\|A0A067JY03_JATCU	5E-175	Uncharacterized protein {ECO:0000313\|EMBL:KDP28732.1}
TAIR10	AT2G45490.1	2E-136	ataurora3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	57230275	57238558	-
GWHAAZE00000009	mRNA	57230275	57238558	-
GWHAAZE00000009	exon	57230275	57230498	-
GWHAAZE00000009	exon	57230631	57231566	-
GWHAAZE00000009	exon	57235603	57235687	-
GWHAAZE00000009	exon	57235795	57235867	-
GWHAAZE00000009	exon	57235958	57236172	-
GWHAAZE00000009	exon	57236884	57236979	-
GWHAAZE00000009	exon	57237863	57238105	-
GWHAAZE00000009	exon	57238377	57238558	-
GWHAAZE00000009	five_prime_UTR	57238497	57238558	-
GWHAAZE00000009	CDS	57238377	57238496	-
GWHAAZE00000009	CDS	57237863	57238105	-
GWHAAZE00000009	CDS	57236884	57236979	-
GWHAAZE00000009	CDS	57235958	57236172	-
GWHAAZE00000009	CDS	57235795	57235867	-
GWHAAZE00000009	CDS	57235603	57235687	-
GWHAAZE00000009	CDS	57230631	57231566	-
GWHAAZE00000009	CDS	57230275	57230498	-

Transcript Sequence
>GWHTAAZE031361 TTCCCTCCAAATCTGAATCAGAAAACCCCCAATTCGTTCTCCTACATTCCCAAATCACAAAAATGGCGTCCAAAACTGAAAAACAAAACCCTAAAAAACAATGGTCCTTAGAAGACTTCGAGATCGGAAAGCCCCTCGGCAAGGGCAAATTCGGACGCGTCTACCTCGCCCGTGAAATCAAGAGCCAGTACATAGTGGCATTGAAGGTGATATTCAAAAAGCAGATGGAGAAGTACAGATTGCACCACCAGCTTAAAAGAGAGATGGAGATCCAAACTAGTCTTCGTCACCCTAACGTACTCGGGCTCTTTGGCTGGTTTCATGATGATGAGAGAATTTACTTGATCTTGGAGTATGCTCATGGTGGTGAGCTTTATAGACAACTCCGAAAAAACGGTCATCTCAGCGAGAAACAAGCTGCCACTTACATATCAAGCTTAACACAAGCATTGGCATATTGTCATGAGAAGGGTGTGATTCATAGGGATATCAAGCCAGAAAATTTATTACTTGATCATGAGGGTGTATTGAAGATTGCGGATTTTGGATGGTCGGTCCAATCGAGAAGCAAGAGACACACCATGTGTGGAACTTTGGACTATTTAGCACCAGAAATGGTGGAGAACAAAGCTCATGATTACGCTGTTGATAATTGGACATTGGGTATCCTTTGTTATGAGTTTTTGTGTGGCAGCCCTCCATTTGAGGCCGAGAGCCAAGGAGATACATTCAAAAGGATTATGAAGATTGACCTGAATTTCCCTTCCACCCCTCAAGTTTCTGCAGAAGCTAAAAATCTCATTACTCGGCTTCTAGTGAAGGACTCTTCTAAAAGGCTCTCTCTTAGGAAGATAATTGAGCACCCTTGGATTATCAAGAATGCTGATCCCACAGTCAGTCTCCTCAATTTCTCCATGGATAACGCCTTTTACCTTTGTCTCTTTACTGTCTCACTTACCGCCATTTCCACCGCCGTAGCTCACAATATCACCGATATCCTCTCGCCGTTCCCCGAGTACAGCCAGTTCAACGACTACCTCACCAAAACAAAGCTCGACGGCGAGATCAATAGTCGACAAACCATAACTATCCTCGTGTTGAACAATGCCGCTGTGTCTGCACTCGCCGGAAAACATCCACTCTCCGTCATCAAAAGCGCTCTCAGCCTCCATGTTTTGTTAGATTACTACGATAACTCTAAGCTCCACAAAATCTCCGACGGTACAACTCTCTCCACTACATTGCTACAAACCACTGGCAATGCTCCCGGTAAGTTAGGGTTCGTAAATATCACCGATCTCAAAGGCGGAAAGGTCGGTTTCGGATCTGCGGTTCCTGGATCCCCTATCGATTCGTTTTATACCAAGTCGGTGAAGCAATTTCCGTTTAATCTATCGATTGTTGAGGTTAATCCTCCGATTATGTCATCTGCGATTTTGAATGCTCCTGCTCCGTCGGCTAATGACGTTAATATCACGGCGGTGTTGGAGAAGGCTGGATGTAAGACATTTGTATCGTTAATTTTGAGTACTGGTGTGATTAAAGTGTATCAAACGGCGGTTGATAAAGGTTTGACTCTGTTTGCACCGTCCGATGAGGCATTCAAGGCTCCTGGAGTGCCAGATCTGAGCAAGCTCACCAATGCAGAGCTGGTGTCGCTTCTACAGTATCATGCCCTAGCTAGTTACACTCCGATGGGGAGTTTGAAGACTACAAAGCAGCCTATCAGTACTTTAGCCACTAACGGCGCCGGGAAGTACGATCTCTCCGTTACGACCGCCGGTGACTCTGTGACTCTCGTCTCCGGTGTCGACTCGTCGCGAGTCGCCGCTACACCGAGTCCTGCGCCCGAATCGGCGAAGGCTCCGTCGCCGTTCTTCTCTCCTCCGGCTCCGCCGATGCCTACACCTGCAGGTGGTCCGGCAGATGGTCCAGGGAGCGACTCGGAGAGCAGTACGTCGGAGAAATCCGCCGGCGTCGTTGAAGCTCCGGCATTGTTGAAGGTTCTAGCCAGTGTGTGCGCCTCAGTTATTGTTTCACTTTTCTTGTCCTAA

Network for GWHGAAZE031327

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	19	270	3.90E-75
PF02469.23	Fasciclin	479	590	5.80E-13

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	Aur

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	76.273
	SRR3591706	second leaf	17.153
	SRR3591707	mature leaf	0.831
	SRR3591708	Shoot apex	55.383
	SRR3591709	Stem	14.734
	SRR3591710	White floral bud	4.154
	SRR3591711	White flower	2.220
	SRR3591712	Green floral bud	11.997
	SRR3591713	Yellow flower	0.465
SRP173429	SRR8316895	Juvenile bud stage	16.851
	SRR8316896	Juvenile bud stage	16.588
	SRR8316897	Juvenile bud stage	6.115
	SRR8316894	Third green stage	7.181
	SRR8316900	Third green stage	14.397
	SRR8316901	Third green stage	10.280
	SRR8316898	Complete white stage	0.528
	SRR8316899	Complete white stage	7.975
	SRR8316903	Complete white stage	1.181
	SRR8316902	Silver flowering stage	0.324
	SRR8316904	Silver flowering stage	0.195
	SRR8316905	Silver flowering stage	0.063
	SRR8316906	Gold flowering stage	0.050
	SRR8316907	Gold flowering stage	0.066
	SRR8316908	Gold flowering stage	0.258
SRP132670	SRR6706286	Control	17.337
	SRR6706287	Light intensity 50%	21.279
	SRR6706288	Light intensity 20%	21.604
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	17.414
	CNS0095593	Slightly white alabastrum(diploid) 2	17.941
	CNS0095594	Slightly white alabastrum(diploid) 3	11.318
	CNS0095595	Whole white alabastrum(diploid) 2	8.322
	CNS0095596	Whole white alabastrum(diploid) 3	7.780
	CNS0095597	Whole white alabastrum(diploid) 4	5.157
	CNS0095598	Silvery flower (diploied) 1	5.718
	CNS0095599	Silvery flower (diploied) 2	3.644
	CNS0095600	Silvery flower (diploied) 3	2.347
	CNS0095601	Golden flower (diploid) 1	5.027
	CNS0095602	Golden flower (diploid) 2	3.276
	CNS0095603	Golden flower (diploid) 3	2.710
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.969
	CNS0095605	Slightly white alabastrum(tetraploid) 2	9.321
	CNS0095606	Slightly white alabastrum(tetraploid) 3	29.188
	CNS0095607	Whole white alabastrum(tetraploid) 1	4.070
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.089
	CNS0095609	Whole white alabastrum(tetraploid) 3	7.975
	CNS0095610	Silvery flower (tetraploid) 1	0.037
	CNS0095611	Silvery flower (tetraploid) 2	0.636
	CNS0095612	Silvery flower (tetraploid) 3	0.443
	CNS0095613	Golden flower (tetraploid) 1	0.035
	CNS0095614	Golden flower (tetraploid) 2	0.011
	CNS0095615	Golden flower (tetraploid) 3	0.024
CRA001975	CRR073297	Stem 1	70.971
	CRR073298	Stem 2	71.342
	CRR073299	Stem 3	117.848
	CRR073300	Leaf 1	53.298
	CRR073301	Leaf 2	54.957
	CRR073302	Leaf 3	62.488
	CRR073303	Juvenile bud 1	45.815
	CRR073304	Juvenile bud 2	19.516
	CRR073305	Juvenile bud 3	67.944
	CRR073306	Third green 1	2.699
	CRR073307	Third green 2	2.914
	CRR073308	Third green 3	2.661
	CRR073309	Second white 1	0.399
	CRR073310	Second white 2	0.017
	CRR073311	Second white 3	0.103
	CRR073312	Silver flowering 1	0.121
	CRR073313	Silver flowering 2	0.067
	CRR073314	Silver flowering 3	0.048
	CRR073315	Gold flowering 1	2.482
	CRR073316	Gold flowering 2	3.502
	CRR073317	Gold flowering 3	4.855
	CRR073318	Tawny withering 1	123.844
	CRR073319	Tawny withering 2	56.392
	CRR073320	Tawny withering 3	157.696