Detail information of GWHGAAZE031294


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009785335.11.91805E-42PREDICTED: uncharacterized protein LOC104233609 [Nicotiana sylvestris]
trEMBLtr|K4AZ43|K4AZ43_SOLLC8E-43Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g091030.2.1}
TAIR10AT3G60690.12E-21SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5674215856742568+
GWHAAZE00000009mRNA5674215856742568+
GWHAAZE00000009exon5674215856742568+
GWHAAZE00000009CDS5674215856742568+
Transcript Sequence

Network for GWHGAAZE031294

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible751341.50E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.840
SRR3591706second leaf31.608
SRR3591707mature leaf82.814
SRR3591708Shoot apex18.974
SRR3591709Stem89.917
SRR3591710White floral bud29.102
SRR3591711White flower61.506
SRR3591712Green floral bud49.060
SRR3591713Yellow flower46.336
SRP173429 SRR8316895Juvenile bud stage 32.902
SRR8316896Juvenile bud stage 11.123
SRR8316897Juvenile bud stage 22.259
SRR8316894Third green stage 17.105
SRR8316900Third green stage 37.305
SRR8316901Third green stage 36.090
SRR8316898Complete white stage 4.600
SRR8316899Complete white stage 51.565
SRR8316903Complete white stage 7.615
SRR8316902Silver flowering stage15.545
SRR8316904Silver flowering stage16.108
SRR8316905Silver flowering stage11.141
SRR8316906Gold flowering stage 54.981
SRR8316907Gold flowering stage 35.744
SRR8316908Gold flowering stage 46.366
SRP132670SRR6706286Control21.461
SRR6706287Light intensity 50%24.685
SRR6706288Light intensity 20%22.375
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.633
CNS0095593Slightly white alabastrum(diploid) 230.999
CNS0095594Slightly white alabastrum(diploid) 326.984
CNS0095595Whole white alabastrum(diploid) 222.736
CNS0095596Whole white alabastrum(diploid) 324.049
CNS0095597Whole white alabastrum(diploid) 418.095
CNS0095598Silvery flower (diploied) 150.940
CNS0095599Silvery flower (diploied) 240.409
CNS0095600Silvery flower (diploied) 336.376
CNS0095601Golden flower (diploid) 140.827
CNS0095602Golden flower (diploid) 246.885
CNS0095603Golden flower (diploid) 349.043
CNS0095604Slightly white alabastrum(tetraploid) 18.831
CNS0095605Slightly white alabastrum(tetraploid) 210.205
CNS0095606Slightly white alabastrum(tetraploid) 313.578
CNS0095607Whole white alabastrum(tetraploid) 19.941
CNS0095608Whole white alabastrum(tetraploid) 28.750
CNS0095609Whole white alabastrum(tetraploid) 37.742
CNS0095610Silvery flower (tetraploid) 14.616
CNS0095611Silvery flower (tetraploid) 25.159
CNS0095612Silvery flower (tetraploid) 37.844
CNS0095613Golden flower (tetraploid) 18.416
CNS0095614Golden flower (tetraploid) 29.075
CNS0095615Golden flower (tetraploid) 36.422
CRA001975CRR073297Stem 114.866
CRR073298Stem 214.424
CRR073299Stem 322.997
CRR073300Leaf 127.720
CRR073301Leaf 241.929
CRR073302Leaf 321.625
CRR073303Juvenile bud 141.891
CRR073304Juvenile bud 211.536
CRR073305Juvenile bud 354.377
CRR073306Third green 16.735
CRR073307Third green 25.901
CRR073308Third green 38.741
CRR073309Second white 12.843
CRR073310Second white 25.405
CRR073311Second white 32.827
CRR073312Silver flowering 114.968
CRR073313Silver flowering 215.117
CRR073314Silver flowering 319.091
CRR073315Gold flowering 1100.520
CRR073316Gold flowering 2119.274
CRR073317Gold flowering 3113.967
CRR073318Tawny withering 185.020
CRR073319Tawny withering 2216.685
CRR073320Tawny withering 394.400