Gene detail

Detail information of GWHGAAZE031188

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009589784.1	0	PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Nicotiana tomentosiformis]
COG	YP_007123031.1	2E-64	cytochrome P450
Swissprot	tr\|O23051\|KAO1_ARATH	0	Ent-kaurenoic acid oxidase 1
trEMBL	tr\|M0ZNP1\|M0ZNP1_SOLTU	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400004597}
TAIR10	AT1G05160.1	0	cytochrome P450, family 88, subfamily A, polypeptide 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	54622624	54635908	-
GWHAAZE00000009	mRNA	54622624	54635908	-
GWHAAZE00000009	exon	54635757	54635908	-
GWHAAZE00000009	exon	54629960	54630437	-
GWHAAZE00000009	exon	54629350	54629613	-
GWHAAZE00000009	exon	54629082	54629171	-
GWHAAZE00000009	exon	54628872	54628950	-
GWHAAZE00000009	exon	54628458	54628564	-
GWHAAZE00000009	exon	54622854	54622975	-
GWHAAZE00000009	exon	54622624	54622729	-
GWHAAZE00000009	CDS	54635757	54635908	-
GWHAAZE00000009	CDS	54629960	54630437	-
GWHAAZE00000009	CDS	54629350	54629613	-
GWHAAZE00000009	CDS	54629082	54629171	-
GWHAAZE00000009	CDS	54628872	54628950	-
GWHAAZE00000009	CDS	54628458	54628564	-
GWHAAZE00000009	CDS	54622854	54622975	-
GWHAAZE00000009	CDS	54622624	54622729	-

Transcript Sequence
>GWHTAAZE031222 ATGTGGGTTTATGAGAGGAAGTTGGGGAACAAGAGGAGATTGGCTCTGCCTCCAGGTGACCTTGGTTGGCCTTTCATTGGCACCATGTGGTCCTTCCTCCGTGCCTTCAAGTCTTCTAATCCTGATTCTTTCATTTCCACCTTTGTTACCAGGTTTGGGCGTACAGGAATTTACAAGACCTTCATGTTTGGCAATCCTAGCATCATCGTTACTACGCCTGAAGGGTGTAGAAAAGTTTTATCTGATGACGAAGCGTTCAAGCCAGGGTGGCCTACTTCCACAATGAAACTTATTGGAAAAAAATCGTTTATAGGCATTTCTTATGAAGAACACAAGCGACTGCGACGACTAACATCCGCACCAGTCAACGGTCATGAGGCATTGTCTATATATATGCAGTATATCGAAGAAATTGTAGTATCTACCTTAGATAAATGGGCTAATATGGGACAAATTGAGTTCTTGACGGAGCTTCGAAGGCTTACATTTAGGATAATTATGCACATTTTCTTAAGCTCAGAAAGCGAGCAGGTAATGGATGCACTAGAGAGAGAATACACAACACTTAATTACGGAGTTAGAGCCATGGCAATCAATGTTCCAGGATTCGCTTATCATAAAGCACTCAAGGCGCGAAAGAAACTTGTGGCGATTTTTCAAACTATAGTGAATGAGCGTAGGGAGCGGAAATCGGGGAATGAAGTGAAATCGAAGAAAGATATGATGGATGCTCTTTTGGATGTTGAAGATGAGAATGGTAGAAGATTGAATGATGAGGAAATAATTGATCTACTTCTTATGTACCTAAATGCTGGCCATGAATCTTCAGGCCATATCACAATGTGGGCCACTCTGTTTCTACAAAAACATCCTGAATCCTTCCTTAAAGCCAAGGTTGAGCAAGAGACAATTGTGAAGAACAGGCCACCAACACAGAAGGGACTGACACTAAAAGAAGTTAGGCAAATGGAGTATCTCTCTAAGGTGATTGATGAAACACTTCGCCTAGTAACATTCTCATTCGTGGTCTTTCGAGAGGCAAAAACAGATTTCAAATTAAATGGTTACACTATTCCTCAAGGATGGAAAGTTTTGGTCTGGTTTAGGACAGTTCACTTGGATTCTGATATTTATCCGGATCCTAAGGAGTTCAATCCTTCTAGATGGGATAATGTTATACCGAGAGCAGGTACTTTCCTACCATTTGGAGCTGGAAGCAGACTGTGCCCCGGAAATGACCTTGCCAAGCTAGAAATCTCTATTTTCCTTCACCATTTTCTCCTTAACTATCAGCTTGAACGAAGTAATCCAGGATGCCCAACAATGTACTTACCTCATTGCAGACCTAAAGACAACTGCTTGGCAAGATTAAGAAGAGTCTCTTCTCCTAGTGTATAA

Network for GWHGAAZE031188

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	17	435	1.90E-63

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K04123	KAO	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Diterpenoid biosynthesis	map00904

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	17.333
	SRR3591706	second leaf	1.573
	SRR3591707	mature leaf	1.553
	SRR3591708	Shoot apex	5.386
	SRR3591709	Stem	16.733
	SRR3591710	White floral bud	3.705
	SRR3591711	White flower	16.418
	SRR3591712	Green floral bud	10.202
	SRR3591713	Yellow flower	6.887
SRP173429	SRR8316895	Juvenile bud stage	2.842
	SRR8316896	Juvenile bud stage	13.422
	SRR8316897	Juvenile bud stage	6.981
	SRR8316894	Third green stage	6.682
	SRR8316900	Third green stage	19.907
	SRR8316901	Third green stage	22.294
	SRR8316898	Complete white stage	2.208
	SRR8316899	Complete white stage	6.079
	SRR8316903	Complete white stage	3.721
	SRR8316902	Silver flowering stage	9.448
	SRR8316904	Silver flowering stage	8.928
	SRR8316905	Silver flowering stage	0.751
	SRR8316906	Gold flowering stage	4.967
	SRR8316907	Gold flowering stage	6.260
	SRR8316908	Gold flowering stage	5.400
SRP132670	SRR6706286	Control	11.680
	SRR6706287	Light intensity 50%	11.249
	SRR6706288	Light intensity 20%	9.064
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	18.240
	CNS0095593	Slightly white alabastrum(diploid) 2	35.477
	CNS0095594	Slightly white alabastrum(diploid) 3	18.864
	CNS0095595	Whole white alabastrum(diploid) 2	18.833
	CNS0095596	Whole white alabastrum(diploid) 3	23.936
	CNS0095597	Whole white alabastrum(diploid) 4	15.417
	CNS0095598	Silvery flower (diploied) 1	11.281
	CNS0095599	Silvery flower (diploied) 2	8.464
	CNS0095600	Silvery flower (diploied) 3	8.434
	CNS0095601	Golden flower (diploid) 1	7.332
	CNS0095602	Golden flower (diploid) 2	10.506
	CNS0095603	Golden flower (diploid) 3	8.588
	CNS0095604	Slightly white alabastrum(tetraploid) 1	30.251
	CNS0095605	Slightly white alabastrum(tetraploid) 2	28.211
	CNS0095606	Slightly white alabastrum(tetraploid) 3	29.586
	CNS0095607	Whole white alabastrum(tetraploid) 1	17.485
	CNS0095608	Whole white alabastrum(tetraploid) 2	12.647
	CNS0095609	Whole white alabastrum(tetraploid) 3	13.978
	CNS0095610	Silvery flower (tetraploid) 1	2.320
	CNS0095611	Silvery flower (tetraploid) 2	2.403
	CNS0095612	Silvery flower (tetraploid) 3	1.890
	CNS0095613	Golden flower (tetraploid) 1	2.194
	CNS0095614	Golden flower (tetraploid) 2	2.229
	CNS0095615	Golden flower (tetraploid) 3	2.261
CRA001975	CRR073297	Stem 1	14.369
	CRR073298	Stem 2	19.023
	CRR073299	Stem 3	10.873
	CRR073300	Leaf 1	16.743
	CRR073301	Leaf 2	16.951
	CRR073302	Leaf 3	13.383
	CRR073303	Juvenile bud 1	5.002
	CRR073304	Juvenile bud 2	0.464
	CRR073305	Juvenile bud 3	9.192
	CRR073306	Third green 1	1.545
	CRR073307	Third green 2	1.465
	CRR073308	Third green 3	2.367
	CRR073309	Second white 1	5.410
	CRR073310	Second white 2	3.768
	CRR073311	Second white 3	5.906
	CRR073312	Silver flowering 1	6.393
	CRR073313	Silver flowering 2	6.342
	CRR073314	Silver flowering 3	9.858
	CRR073315	Gold flowering 1	0.048
	CRR073316	Gold flowering 2	0.411
	CRR073317	Gold flowering 3	0.482
	CRR073318	Tawny withering 1	2.946
	CRR073319	Tawny withering 2	3.434
	CRR073320	Tawny withering 3	3.730