Detail information of GWHGAAZE031169


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrP09469.1VATA_DAUCA0RecName: Full=V-type proton ATPase catalytic subunit A; Short=V-ATPase subunit A; AltName: Full=V-ATPase 69 kDa subunit; AltName: Full=Vacuolar proton pump subunit alpha [Daucus carota]
COGNP_276090.10V-type ATP synthase subunit A
Swissprottr|P09469|VATA_DAUCA0V-type proton ATPase catalytic subunit A
trEMBLtr|D7SS06|D7SS06_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI18438.3}
TAIR10AT1G78900.20vacuolar ATP synthase subunit A

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5424000954249266-
GWHAAZE00000009mRNA5424000954249266-
GWHAAZE00000009exon5424918954249266-
GWHAAZE00000009exon5424853454248660-
GWHAAZE00000009exon5424779554247850-
GWHAAZE00000009exon5424759554247651-
GWHAAZE00000009exon5424733754247448-
GWHAAZE00000009exon5424720154247238-
GWHAAZE00000009exon5424698254247083-
GWHAAZE00000009exon5424597554246031-
GWHAAZE00000009exon5424579654245867-
GWHAAZE00000009exon5424559754245698-
GWHAAZE00000009exon5424520654245338-
GWHAAZE00000009exon5424403454244140-
GWHAAZE00000009exon5424305854243252-
GWHAAZE00000009exon5424161454241700-
GWHAAZE00000009exon5424138354241487-
GWHAAZE00000009exon5424086054240957-
GWHAAZE00000009exon5424067554240753-
GWHAAZE00000009exon5424023654240324-
GWHAAZE00000009exon5424000954240123-
GWHAAZE00000009CDS5424918954249266-
GWHAAZE00000009CDS5424853454248660-
GWHAAZE00000009CDS5424779554247850-
GWHAAZE00000009CDS5424759554247651-
GWHAAZE00000009CDS5424733754247448-
GWHAAZE00000009CDS5424720154247238-
GWHAAZE00000009CDS5424698254247083-
GWHAAZE00000009CDS5424597554246031-
GWHAAZE00000009CDS5424579654245867-
GWHAAZE00000009CDS5424559754245698-
GWHAAZE00000009CDS5424520654245338-
GWHAAZE00000009CDS5424403454244140-
GWHAAZE00000009CDS5424305854243252-
GWHAAZE00000009CDS5424161454241700-
GWHAAZE00000009CDS5424138354241487-
GWHAAZE00000009CDS5424086054240957-
GWHAAZE00000009CDS5424067554240753-
GWHAAZE00000009CDS5424023654240324-
GWHAAZE00000009CDS5424000954240123-
Transcript Sequence

Network for GWHGAAZE031169

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02874.24ATP-synt_ab_N26851.40E-13
PF16886.6ATP-synt_ab_Xtn1022231.10E-40
PF00006.26ATP-synt_ab2324373.00E-90
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02145ATPeV1A, ATP6A Metabolic pathways map01100
Oxidative phosphorylationmap00190
mTOR signaling pathwaymap04150
Phagosomemap04145
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0046034biological_processATP metabolic process
GO:1902600biological_processproton transmembrane transport
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf361.095
SRR3591706second leaf212.990
SRR3591707mature leaf159.271
SRR3591708Shoot apex227.276
SRR3591709Stem186.409
SRR3591710White floral bud233.922
SRR3591711White flower243.037
SRR3591712Green floral bud271.898
SRR3591713Yellow flower193.364
SRP173429 SRR8316895Juvenile bud stage 173.020
SRR8316896Juvenile bud stage 234.884
SRR8316897Juvenile bud stage 129.055
SRR8316894Third green stage 102.559
SRR8316900Third green stage 310.471
SRR8316901Third green stage 282.341
SRR8316898Complete white stage 125.182
SRR8316899Complete white stage 278.463
SRR8316903Complete white stage 198.088
SRR8316902Silver flowering stage136.273
SRR8316904Silver flowering stage191.582
SRR8316905Silver flowering stage97.667
SRR8316906Gold flowering stage 338.215
SRR8316907Gold flowering stage 331.636
SRR8316908Gold flowering stage 367.417
SRP132670SRR6706286Control223.307
SRR6706287Light intensity 50%244.892
SRR6706288Light intensity 20%271.119
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1155.664
CNS0095593Slightly white alabastrum(diploid) 2161.021
CNS0095594Slightly white alabastrum(diploid) 3151.986
CNS0095595Whole white alabastrum(diploid) 2155.946
CNS0095596Whole white alabastrum(diploid) 3149.621
CNS0095597Whole white alabastrum(diploid) 4131.838
CNS0095598Silvery flower (diploied) 1190.632
CNS0095599Silvery flower (diploied) 2198.633
CNS0095600Silvery flower (diploied) 3307.125
CNS0095601Golden flower (diploid) 1169.541
CNS0095602Golden flower (diploid) 2311.997
CNS0095603Golden flower (diploid) 3292.382
CNS0095604Slightly white alabastrum(tetraploid) 1206.242
CNS0095605Slightly white alabastrum(tetraploid) 2163.252
CNS0095606Slightly white alabastrum(tetraploid) 3355.377
CNS0095607Whole white alabastrum(tetraploid) 1139.588
CNS0095608Whole white alabastrum(tetraploid) 2129.327
CNS0095609Whole white alabastrum(tetraploid) 3295.087
CNS0095610Silvery flower (tetraploid) 1305.566
CNS0095611Silvery flower (tetraploid) 2324.513
CNS0095612Silvery flower (tetraploid) 3257.395
CNS0095613Golden flower (tetraploid) 1172.471
CNS0095614Golden flower (tetraploid) 2280.404
CNS0095615Golden flower (tetraploid) 3246.887
CRA001975CRR073297Stem 1280.523
CRR073298Stem 2264.072
CRR073299Stem 3298.468
CRR073300Leaf 1278.089
CRR073301Leaf 2266.967
CRR073302Leaf 3271.891
CRR073303Juvenile bud 1319.394
CRR073304Juvenile bud 2258.499
CRR073305Juvenile bud 3377.787
CRR073306Third green 1247.076
CRR073307Third green 2198.072
CRR073308Third green 3225.214
CRR073309Second white 1360.108
CRR073310Second white 2282.157
CRR073311Second white 3301.125
CRR073312Silver flowering 1329.176
CRR073313Silver flowering 2392.041
CRR073314Silver flowering 3295.584
CRR073315Gold flowering 1101.078
CRR073316Gold flowering 2121.159
CRR073317Gold flowering 3140.917
CRR073318Tawny withering 1225.649
CRR073319Tawny withering 2168.934
CRR073320Tawny withering 3226.800