Detail information of GWHGAAZE031147


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009796491.10PREDICTED: uncharacterized protein LOC104243063 [Nicotiana sylvestris]
trEMBLtr|M1AIR5|M1AIR5_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400023652}
TAIR10AT5G50420.10O-fucosyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5392929553932560+
GWHAAZE00000009mRNA5392929553932560+
GWHAAZE00000009exon5392929553930628+
GWHAAZE00000009exon5393139753931646+
GWHAAZE00000009exon5393238453932560+
GWHAAZE00000009CDS5392929553930628+
GWHAAZE00000009CDS5393139753931646+
GWHAAZE00000009CDS5393238453932560+
Transcript Sequence

Network for GWHGAAZE031147

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10250.10O-FucT2615605.10E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03691POFUT Other types of O-glycan biosynthesis map00514

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf65.278
SRR3591706second leaf27.060
SRR3591707mature leaf15.960
SRR3591708Shoot apex37.331
SRR3591709Stem101.274
SRR3591710White floral bud21.581
SRR3591711White flower15.439
SRR3591712Green floral bud28.949
SRR3591713Yellow flower6.079
SRP173429 SRR8316895Juvenile bud stage 23.787
SRR8316896Juvenile bud stage 23.645
SRR8316897Juvenile bud stage 10.986
SRR8316894Third green stage 11.733
SRR8316900Third green stage 27.832
SRR8316901Third green stage 23.508
SRR8316898Complete white stage 6.643
SRR8316899Complete white stage 28.394
SRR8316903Complete white stage 15.967
SRR8316902Silver flowering stage4.506
SRR8316904Silver flowering stage7.390
SRR8316905Silver flowering stage3.208
SRR8316906Gold flowering stage 9.531
SRR8316907Gold flowering stage 8.287
SRR8316908Gold flowering stage 7.690
SRP132670SRR6706286Control21.363
SRR6706287Light intensity 50%20.287
SRR6706288Light intensity 20%22.189
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.422
CNS0095593Slightly white alabastrum(diploid) 219.454
CNS0095594Slightly white alabastrum(diploid) 318.980
CNS0095595Whole white alabastrum(diploid) 218.882
CNS0095596Whole white alabastrum(diploid) 316.868
CNS0095597Whole white alabastrum(diploid) 417.106
CNS0095598Silvery flower (diploied) 118.410
CNS0095599Silvery flower (diploied) 216.549
CNS0095600Silvery flower (diploied) 321.405
CNS0095601Golden flower (diploid) 116.250
CNS0095602Golden flower (diploid) 221.450
CNS0095603Golden flower (diploid) 322.333
CNS0095604Slightly white alabastrum(tetraploid) 125.917
CNS0095605Slightly white alabastrum(tetraploid) 225.310
CNS0095606Slightly white alabastrum(tetraploid) 340.583
CNS0095607Whole white alabastrum(tetraploid) 117.983
CNS0095608Whole white alabastrum(tetraploid) 214.509
CNS0095609Whole white alabastrum(tetraploid) 322.188
CNS0095610Silvery flower (tetraploid) 117.125
CNS0095611Silvery flower (tetraploid) 221.185
CNS0095612Silvery flower (tetraploid) 311.129
CNS0095613Golden flower (tetraploid) 15.805
CNS0095614Golden flower (tetraploid) 216.701
CNS0095615Golden flower (tetraploid) 37.081
CRA001975CRR073297Stem 135.379
CRR073298Stem 233.322
CRR073299Stem 337.873
CRR073300Leaf 127.469
CRR073301Leaf 225.361
CRR073302Leaf 323.818
CRR073303Juvenile bud 128.895
CRR073304Juvenile bud 221.697
CRR073305Juvenile bud 337.830
CRR073306Third green 14.778
CRR073307Third green 24.018
CRR073308Third green 34.526
CRR073309Second white 13.869
CRR073310Second white 23.619
CRR073311Second white 32.242
CRR073312Silver flowering 11.670
CRR073313Silver flowering 21.307
CRR073314Silver flowering 31.407
CRR073315Gold flowering 125.994
CRR073316Gold flowering 227.169
CRR073317Gold flowering 322.897
CRR073318Tawny withering 130.803
CRR073319Tawny withering 226.922
CRR073320Tawny withering 335.412