Detail information of GWHGAAZE031074


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010654075.11.31019E-74PREDICTED: CAAX prenyl protease 2 isoform X2 [Vitis vinifera]
Swissprottr|Q8GW19|FACE2_ARATH2E-47CAAX prenyl protease 2
trEMBLtr|A0A067L6C0|A0A067L6C0_JATCU3E-57Uncharacterized protein {ECO:0000313|EMBL:KDP42733.1}
TAIR10AT2G36305.12E-40farnesylated protein-converting enzyme 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5259957852605241-
GWHAAZE00000009mRNA5259957852605241-
GWHAAZE00000009exon5259957852599678-
GWHAAZE00000009exon5259990252600081-
GWHAAZE00000009exon5260090152600972-
GWHAAZE00000009exon5260206052602171-
GWHAAZE00000009exon5260402752604086-
GWHAAZE00000009exon5260491752605241-
GWHAAZE00000009five_prime_UTR5260518752605241-
GWHAAZE00000009CDS5260491752605186-
GWHAAZE00000009CDS5260402752604086-
GWHAAZE00000009CDS5260206052602171-
GWHAAZE00000009CDS5260090152600972-
GWHAAZE00000009CDS5259990252600081-
GWHAAZE00000009CDS5259957852599678-
Transcript Sequence

Network for GWHGAAZE031074

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02517.17CPBP1092471.50E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08658RCE1, FACE2 Biosynthesis of secondary metabolites map01110
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName
GO:0071586biological_processCAAX-box protein processing
GO:0016020cellular_componentmembrane
GO:0030176cellular_componentintegral component of endoplasmic reticulum membrane
GO:0004197molecular_functioncysteine-type endopeptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.148
SRR3591706second leaf4.889
SRR3591707mature leaf3.982
SRR3591708Shoot apex11.412
SRR3591709Stem8.964
SRR3591710White floral bud5.903
SRR3591711White flower6.777
SRR3591712Green floral bud8.716
SRR3591713Yellow flower7.243
SRP173429 SRR8316895Juvenile bud stage 5.399
SRR8316896Juvenile bud stage 9.181
SRR8316897Juvenile bud stage 3.224
SRR8316894Third green stage 4.213
SRR8316900Third green stage 9.985
SRR8316901Third green stage 9.241
SRR8316898Complete white stage 2.626
SRR8316899Complete white stage 12.402
SRR8316903Complete white stage 5.011
SRR8316902Silver flowering stage4.559
SRR8316904Silver flowering stage4.996
SRR8316905Silver flowering stage3.039
SRR8316906Gold flowering stage 8.097
SRR8316907Gold flowering stage 10.008
SRR8316908Gold flowering stage 9.069
SRP132670SRR6706286Control11.251
SRR6706287Light intensity 50%12.291
SRR6706288Light intensity 20%13.349
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.445
CNS0095593Slightly white alabastrum(diploid) 27.348
CNS0095594Slightly white alabastrum(diploid) 38.704
CNS0095595Whole white alabastrum(diploid) 28.140
CNS0095596Whole white alabastrum(diploid) 37.748
CNS0095597Whole white alabastrum(diploid) 48.675
CNS0095598Silvery flower (diploied) 18.791
CNS0095599Silvery flower (diploied) 25.219
CNS0095600Silvery flower (diploied) 34.894
CNS0095601Golden flower (diploid) 15.929
CNS0095602Golden flower (diploid) 25.765
CNS0095603Golden flower (diploid) 35.451
CNS0095604Slightly white alabastrum(tetraploid) 17.892
CNS0095605Slightly white alabastrum(tetraploid) 27.285
CNS0095606Slightly white alabastrum(tetraploid) 39.975
CNS0095607Whole white alabastrum(tetraploid) 14.970
CNS0095608Whole white alabastrum(tetraploid) 24.106
CNS0095609Whole white alabastrum(tetraploid) 37.026
CNS0095610Silvery flower (tetraploid) 15.364
CNS0095611Silvery flower (tetraploid) 25.413
CNS0095612Silvery flower (tetraploid) 35.593
CNS0095613Golden flower (tetraploid) 14.871
CNS0095614Golden flower (tetraploid) 24.596
CNS0095615Golden flower (tetraploid) 34.094
CRA001975CRR073297Stem 17.536
CRR073298Stem 27.630
CRR073299Stem 36.651
CRR073300Leaf 19.410
CRR073301Leaf 27.452
CRR073302Leaf 35.369
CRR073303Juvenile bud 17.324
CRR073304Juvenile bud 26.875
CRR073305Juvenile bud 35.604
CRR073306Third green 12.709
CRR073307Third green 22.927
CRR073308Third green 32.807
CRR073309Second white 11.777
CRR073310Second white 22.769
CRR073311Second white 32.866
CRR073312Silver flowering 12.129
CRR073313Silver flowering 21.938
CRR073314Silver flowering 32.006
CRR073315Gold flowering 11.220
CRR073316Gold flowering 25.243
CRR073317Gold flowering 31.135
CRR073318Tawny withering 15.959
CRR073319Tawny withering 28.854
CRR073320Tawny withering 37.173