Detail information of GWHGAAZE031027


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP40764.11.93724E-66hypothetical protein JCGZ_24763 [Jatropha curcas]
Swissprottr|Q9LRW1|LBD22_ARATH9E-53LOB domain-containing protein 22
trEMBLtr|A0A067L9L1|A0A067L9L1_JATCU7E-67Uncharacterized protein {ECO:0000313|EMBL:KDP40764.1}
TAIR10AT3G13850.14E-43LOB domain-containing protein 22

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5194283451943226+
GWHAAZE00000009mRNA5194283451943226+
GWHAAZE00000009exon5194283451943226+
GWHAAZE00000009CDS5194283451943226+
Transcript Sequence

Network for GWHGAAZE031027

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB211169.10E-37
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.542
SRR3591710White floral bud6.649
SRR3591711White flower0.000
SRR3591712Green floral bud14.830
SRR3591713Yellow flower0.273
SRP173429 SRR8316895Juvenile bud stage 1.670
SRR8316896Juvenile bud stage 11.839
SRR8316897Juvenile bud stage 8.508
SRR8316894Third green stage 5.242
SRR8316900Third green stage 15.991
SRR8316901Third green stage 21.641
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.032
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.179
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control14.123
SRR6706287Light intensity 50%14.690
SRR6706288Light intensity 20%9.364
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.979
CNS0095593Slightly white alabastrum(diploid) 27.848
CNS0095594Slightly white alabastrum(diploid) 313.270
CNS0095595Whole white alabastrum(diploid) 211.897
CNS0095596Whole white alabastrum(diploid) 318.653
CNS0095597Whole white alabastrum(diploid) 410.765
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.209
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.209
CNS0095604Slightly white alabastrum(tetraploid) 118.989
CNS0095605Slightly white alabastrum(tetraploid) 219.976
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 123.952
CNS0095608Whole white alabastrum(tetraploid) 217.367
CNS0095609Whole white alabastrum(tetraploid) 313.589
CNS0095610Silvery flower (tetraploid) 10.165
CNS0095611Silvery flower (tetraploid) 20.503
CNS0095612Silvery flower (tetraploid) 30.860
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.255
CRA001975CRR073297Stem 14.741
CRR073298Stem 26.340
CRR073299Stem 33.337
CRR073300Leaf 113.823
CRR073301Leaf 210.020
CRR073302Leaf 36.854
CRR073303Juvenile bud 14.867
CRR073304Juvenile bud 28.879
CRR073305Juvenile bud 30.148
CRR073306Third green 11.781
CRR073307Third green 22.246
CRR073308Third green 32.624
CRR073309Second white 10.172
CRR073310Second white 20.226
CRR073311Second white 30.262
CRR073312Silver flowering 11.153
CRR073313Silver flowering 21.738
CRR073314Silver flowering 32.116
CRR073315Gold flowering 11.090
CRR073316Gold flowering 20.488
CRR073317Gold flowering 32.376
CRR073318Tawny withering 11.741
CRR073319Tawny withering 20.600
CRR073320Tawny withering 30.810