Detail information of GWHGAAZE030989


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007223916.11.01043E-81hypothetical protein PRUPE_ppa013278mg [Prunus persica]
Swissprottr|Q9XF37|PROF_APIGR1E-82Profilin
trEMBLtr|M5Y0F4|M5Y0F4_PRUPE4E-82Profilin {ECO:0000256|RuleBase:RU003909}
TAIR10AT2G19770.15E-64profilin 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5145204051453566-
GWHAAZE00000009mRNA5145204051453566-
GWHAAZE00000009exon5145204051452174-
GWHAAZE00000009exon5145237451452511-
GWHAAZE00000009exon5145344451453566-
GWHAAZE00000009CDS5145344451453566-
GWHAAZE00000009CDS5145237451452511-
GWHAAZE00000009CDS5145204051452174-
Transcript Sequence

Network for GWHGAAZE030989

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00235.20Profilin11308.70E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05759PFN Rap1 signaling pathway map04015
MAPK signaling pathway - flymap04013
Regulation of actin cytoskeletonmap04810

Gene Ontology

GO term OntologyName
GO:0003779molecular_functionactin binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf99.016
SRR3591706second leaf25.827
SRR3591707mature leaf3.628
SRR3591708Shoot apex52.612
SRR3591709Stem38.403
SRR3591710White floral bud125.272
SRR3591711White flower12.190
SRR3591712Green floral bud906.513
SRR3591713Yellow flower3.778
SRP173429 SRR8316895Juvenile bud stage 273.220
SRR8316896Juvenile bud stage 698.307
SRR8316897Juvenile bud stage 303.476
SRR8316894Third green stage 258.408
SRR8316900Third green stage 937.140
SRR8316901Third green stage 998.017
SRR8316898Complete white stage 14.335
SRR8316899Complete white stage 34.968
SRR8316903Complete white stage 21.059
SRR8316902Silver flowering stage4.647
SRR8316904Silver flowering stage9.205
SRR8316905Silver flowering stage4.259
SRR8316906Gold flowering stage 4.332
SRR8316907Gold flowering stage 4.433
SRR8316908Gold flowering stage 2.504
SRP132670SRR6706286Control581.435
SRR6706287Light intensity 50%549.138
SRR6706288Light intensity 20%510.486
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1563.812
CNS0095593Slightly white alabastrum(diploid) 2377.357
CNS0095594Slightly white alabastrum(diploid) 3618.335
CNS0095595Whole white alabastrum(diploid) 2670.373
CNS0095596Whole white alabastrum(diploid) 3894.511
CNS0095597Whole white alabastrum(diploid) 4627.632
CNS0095598Silvery flower (diploied) 114.364
CNS0095599Silvery flower (diploied) 227.815
CNS0095600Silvery flower (diploied) 313.884
CNS0095601Golden flower (diploid) 113.591
CNS0095602Golden flower (diploid) 211.377
CNS0095603Golden flower (diploid) 311.087
CNS0095604Slightly white alabastrum(tetraploid) 11107.620
CNS0095605Slightly white alabastrum(tetraploid) 21079.450
CNS0095606Slightly white alabastrum(tetraploid) 347.024
CNS0095607Whole white alabastrum(tetraploid) 11461.457
CNS0095608Whole white alabastrum(tetraploid) 21596.915
CNS0095609Whole white alabastrum(tetraploid) 3993.264
CNS0095610Silvery flower (tetraploid) 18.743
CNS0095611Silvery flower (tetraploid) 219.307
CNS0095612Silvery flower (tetraploid) 340.483
CNS0095613Golden flower (tetraploid) 17.683
CNS0095614Golden flower (tetraploid) 211.588
CNS0095615Golden flower (tetraploid) 349.749
CRA001975CRR073297Stem 1284.375
CRR073298Stem 2310.062
CRR073299Stem 3218.759
CRR073300Leaf 1459.068
CRR073301Leaf 2461.939
CRR073302Leaf 3428.699
CRR073303Juvenile bud 1424.133
CRR073304Juvenile bud 2639.753
CRR073305Juvenile bud 338.804
CRR073306Third green 160.032
CRR073307Third green 2101.394
CRR073308Third green 375.891
CRR073309Second white 15.329
CRR073310Second white 23.441
CRR073311Second white 34.815
CRR073312Silver flowering 141.451
CRR073313Silver flowering 250.278
CRR073314Silver flowering 317.438
CRR073315Gold flowering 147.864
CRR073316Gold flowering 210.100
CRR073317Gold flowering 336.219
CRR073318Tawny withering 171.373
CRR073319Tawny withering 271.226
CRR073320Tawny withering 390.802