Detail information of GWHGAAZE030917


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002285258.10PREDICTED: caffeoylshikimate esterase [Vitis vinifera]
COGYP_003571913.19E-37lysophospholipase
Swissprottr|Q9C942|CSE_ARATH9E-177Caffeoylshikimate esterase
trEMBLtr|F6HX77|F6HX77_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB59547.1}
TAIR10AT1G52760.18E-141lysophospholipase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5039312250400142+
GWHAAZE00000009mRNA5039312250400142+
GWHAAZE00000009exon5039312250393601+
GWHAAZE00000009exon5039970250400142+
GWHAAZE00000009CDS5039312250393601+
GWHAAZE00000009CDS5039970250400142+
Transcript Sequence

Network for GWHGAAZE030917

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12146.9Hydrolase_4382801.10E-51
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K18368CSE Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf250.412
SRR3591706second leaf110.492
SRR3591707mature leaf62.572
SRR3591708Shoot apex173.119
SRR3591709Stem309.249
SRR3591710White floral bud205.421
SRR3591711White flower272.247
SRR3591712Green floral bud188.967
SRR3591713Yellow flower287.717
SRP173429 SRR8316895Juvenile bud stage 124.555
SRR8316896Juvenile bud stage 149.285
SRR8316897Juvenile bud stage 70.516
SRR8316894Third green stage 58.406
SRR8316900Third green stage 233.426
SRR8316901Third green stage 215.132
SRR8316898Complete white stage 131.661
SRR8316899Complete white stage 317.173
SRR8316903Complete white stage 152.811
SRR8316902Silver flowering stage146.802
SRR8316904Silver flowering stage177.375
SRR8316905Silver flowering stage102.434
SRR8316906Gold flowering stage 281.366
SRR8316907Gold flowering stage 314.777
SRR8316908Gold flowering stage 343.897
SRP132670SRR6706286Control265.359
SRR6706287Light intensity 50%257.319
SRR6706288Light intensity 20%269.479
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1186.717
CNS0095593Slightly white alabastrum(diploid) 2217.131
CNS0095594Slightly white alabastrum(diploid) 3184.987
CNS0095595Whole white alabastrum(diploid) 2181.859
CNS0095596Whole white alabastrum(diploid) 3168.338
CNS0095597Whole white alabastrum(diploid) 4171.657
CNS0095598Silvery flower (diploied) 1193.392
CNS0095599Silvery flower (diploied) 2200.650
CNS0095600Silvery flower (diploied) 3327.541
CNS0095601Golden flower (diploid) 1197.487
CNS0095602Golden flower (diploid) 2292.205
CNS0095603Golden flower (diploid) 3273.465
CNS0095604Slightly white alabastrum(tetraploid) 1173.155
CNS0095605Slightly white alabastrum(tetraploid) 2151.734
CNS0095606Slightly white alabastrum(tetraploid) 3301.472
CNS0095607Whole white alabastrum(tetraploid) 1124.351
CNS0095608Whole white alabastrum(tetraploid) 2118.627
CNS0095609Whole white alabastrum(tetraploid) 3229.792
CNS0095610Silvery flower (tetraploid) 1298.865
CNS0095611Silvery flower (tetraploid) 2294.966
CNS0095612Silvery flower (tetraploid) 3293.565
CNS0095613Golden flower (tetraploid) 1256.448
CNS0095614Golden flower (tetraploid) 2275.946
CNS0095615Golden flower (tetraploid) 3181.042
CRA001975CRR073297Stem 1201.092
CRR073298Stem 2203.328
CRR073299Stem 3265.910
CRR073300Leaf 1255.925
CRR073301Leaf 2300.665
CRR073302Leaf 3328.133
CRR073303Juvenile bud 1376.773
CRR073304Juvenile bud 2389.783
CRR073305Juvenile bud 3415.246
CRR073306Third green 1501.066
CRR073307Third green 2466.289
CRR073308Third green 3402.453
CRR073309Second white 1406.265
CRR073310Second white 2301.159
CRR073311Second white 3262.872
CRR073312Silver flowering 1356.290
CRR073313Silver flowering 2376.782
CRR073314Silver flowering 3365.915
CRR073315Gold flowering 187.928
CRR073316Gold flowering 298.335
CRR073317Gold flowering 3100.821
CRR073318Tawny withering 1449.927
CRR073319Tawny withering 2389.405
CRR073320Tawny withering 3373.979